Vibrio iocasae: SNR28_13855
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Entry
SNR28_13855 CDS
T11169
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vic Vibrio iocasae
Pathway
vic00020
Citrate cycle (TCA cycle)
vic00640
Propanoate metabolism
vic00660
C5-Branched dibasic acid metabolism
vic00720
Other carbon fixation pathways
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
vic01120
Microbial metabolism in diverse environments
vic01200
Carbon metabolism
Module
vic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SNR28_13855 (sucD)
00640 Propanoate metabolism
SNR28_13855 (sucD)
00660 C5-Branched dibasic acid metabolism
SNR28_13855 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
SNR28_13855 (sucD)
Enzymes [BR:
vic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SNR28_13855 (sucD)
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Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
XHF85781
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All DBs
Position
2:902517..903389
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AA seq
290 aa
AA seq
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MSVLIDKNTKVICQGFTGGQGTFHSEQAIEYGTQMVGGVSPGKGGQTHLGLPVFNTVRDA
VEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDTEGVVMI
GPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTAEDKFAALESAGVKTVKSLADIGKALREVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattaatcgataaaaataccaaagttatttgtcagggctttactggtggtcag
ggtactttccactcggaacaagctattgaatacggaactcaaatggttggtggtgtttca
cctggcaaaggtggccagactcacctaggtctaccagtattcaatacggttcgtgacgct
gttgaagcaacaggtgctactgcatcagttatctatgtcccggctcctttctgtaaagat
gcgattcttgaagcgattgatgcgggcatcaagctgattgttactatcacagaaggtatt
ccaacacttgacctgctagacgtaaaagtacgtctggatactgaaggtgttgtgatgatc
ggtcctaactgcccgggtgtgatcactccggatgagtgtaagatcggtatcatgcctggt
catattcataagaagggtaaagtaggtatcgtatcgcgttctggtactctgacttatgaa
gcggttaagcagacaactgacgaaggctttggtcagtctacttgtgttggtatcggtggt
gacccaattccaggctcaaacttcatcgatattctgaagttgttccaggaagaccctgaa
actgaagcaatcgtaatgattggtgaaatcggtggtactgcagaagaagaagcggctgcg
tttattaaagaaaacgtaactaagccggttgtttcatacattgcaggtgttacagcacct
ccgggtaagcgtatgggccatgctggtgcgattatttctggtggtaaaggtacggctgaa
gataagtttgccgcacttgagtcagcaggtgttaagacggttaaaagtcttgcagatatc
ggtaaagcacttcgtgaagtgacaggctggtaa
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