Vibrio iocasae: SNR28_15090
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Entry
SNR28_15090 CDS
T11169
Name
(GenBank) H-NS family nucleoid-associated regulatory protein
KO
K03746
DNA-binding protein H-NS
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vic03036
]
SNR28_15090
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_15090
Chromosome and associated proteins [BR:
vic03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
SNR28_15090
DNA repair and recombination proteins [BR:
vic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNR28_15090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF4355
YkyA
DUF2203
V-SNARE
CUX1_N
LMWPc
Orbi_VP5
Motif
Other DBs
NCBI-ProteinID:
XHF86012
LinkDB
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Position
2:complement(1169566..1169973)
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AA seq
135 aa
AA seq
DB search
MSELTKTLLNIRSLRAYARELTLEQLEEALDKLTTVVDERRSAAEEEKAALAEREAKLSE
YAQMIAQDGIDVEDLIAALSGETKTKTRKKREPRPAKYKYVDVTGEEKTWTGQGRTPSAI
QSQLDQGKSMDDFLI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacttaccaaaactctgctcaatattcgtagccttcgcgcatacgctcgcgaa
ttaactttagagcagttagaagaagccttagataaactaacgactgttgttgacgagcgt
cgctcagcagcagaagaagaaaaagcagctcttgctgaacgtgaagcaaaactatctgaa
tatgcacagatgattgctcaggacggaattgatgttgaagatttaatagcagctctttct
ggtgaaactaaaactaaaacccgtaaaaaacgcgagcctcgtcctgcaaaatataaatat
gtagatgtaactggtgaggaaaaaacttggactggtcagggtcgtacaccttctgctatc
cagagccaacttgaccagggtaaatcaatggatgatttcctaatctaa
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