Vibrio iocasae: SNR28_16180
Help
Entry
SNR28_16180 CDS
T11169
Name
(GenBank) GntR family transcriptional regulator
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vic03000
]
SNR28_16180
Transcription factors [BR:
vic03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SNR28_16180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_36
HTH_24
HTH_Crp_2
MerR
FilR1_N
HVO_A0261_N
HTH_DeoR
DIP2311-like_C
HTH_28
TrmB
MarR_2
Motif
Other DBs
NCBI-ProteinID:
XHF86223
LinkDB
All DBs
Position
2:complement(1384340..1385254)
Genome browser
AA seq
304 aa
AA seq
DB search
MARNKNLRESTSNQLLDAISMGHIASPLPSQSSLSELFGVSRTTIRHVVKDLCEKGILKL
VEGECVIERLPQETDIFQQPASSDEIQTKEFELYFNECIKNRDIMPGDEFSELELSKQSN
CSTRVIREFLIKFSRFNLIENTSRGRWRMVRFEHGYAENLIELREMLESHALSKFMNLPK
DDQRWKEAQILLQSHRELREEVVNEYQAFSDLDRTFHYLILSAANNPFMEQFYEIMSVIF
HYHYQWDNSDLRKRNMVAIEEHMAVLSKMLTGDDIGAIGALRHHLQTAKRNMEHSLITDN
AEPA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaataaaaacctaagagagagcacttcgaatcaactgctagatgccatttcg
atgggacatatagcatcaccactaccctctcaatcttctctttcagaactgtttggtgta
agccggacaacgataagacacgtcgttaaagacttatgtgaaaagggtattttgaaactg
gttgagggcgagtgtgtcattgaacggttaccccaggaaaccgacatttttcaacaacca
gcatccagtgatgaaatccagaccaaagaatttgagctctattttaacgagtgtataaaa
aacagagatattatgcccggagatgagttttcggagctcgaactctctaaacagtccaac
tgttccactcgggttattcgcgagttcctgataaagttctctcggttcaacctgattgaa
aacacgtcaagaggccgttggcgtatggtgcgttttgaacacggatacgcagagaacctt
atcgaactgcgtgaaatgctggaaagtcatgccttaagtaaatttatgaaccttccaaaa
gatgatcagaggtggaaagaagctcagatcctgcttcagtctcaccgggagctaagagaa
gaggttgtgaatgagtaccaggccttttcagacctcgaccgcacatttcattacctgatc
ttatctgcggcaaataatccctttatggaacagttctatgaaattatgtcggtgatattt
cactaccattatcaatgggataatagtgatttgcgaaagagaaacatggtggcaattgaa
gagcatatggcggtactcagcaaaatgttgaccggtgatgacataggtgccatcggtgct
cttagacatcaccttcagacagccaaaagaaatatggaacatagtcttattacagataac
gcagagccagcataa
DBGET
integrated database retrieval system
