Vibrio iocasae: SNR28_16945
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Entry
SNR28_16945 CDS
T11169
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vic03000
]
SNR28_16945
Transcription factors [BR:
vic03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SNR28_16945
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_4
Peripla_BP_1
LacI
HTH_3
Peripla_BP_6
HTH_31
TetR_N
HTH_10
Sigma54_DBD
TrmB
HTH_IclR
MarR_2
HTH_26
Motif
Other DBs
NCBI-ProteinID:
XHF86370
LinkDB
All DBs
Position
2:1560141..1561154
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AA seq
337 aa
AA seq
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MKVTMLDVAKKAGVSKATVSRVLNKKNIVRPDLVKRVYEAIAETGYRPNILAQNLANQKT
NFIGFVMSNVLFDGPYFSTLMSNAASYCEENSHQLVVIDGKHSKAEERHAINLLLDMKCA
GIIVYPKFLNEKDLGEIISSTETPIVVLNKTVSDYPDNAVTTDHYQSACLLIEHFVQQGH
REIAIIRGNINSGTDKQRYQAYRDVLQKHGIPINIEFEQQGNWRPEGGYAAAQALLKASH
KPTAVIANNDDMAIGAMKAFQTAGIKLPDDISIAGFDNSKMGEYLSPGLSTVSVPLENMT
KKAVLKVIGEHQGAQKIPANGALVIRDSISCIKVRSC
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaccatgctggatgttgcaaaaaaggcaggagtctcaaaggcaaccgtatcg
cgggttctgaacaagaagaacattgttcgaccggatttggtgaaacgtgtttatgaggcg
attgctgaaacgggctacagacctaatatccttgctcagaacctagcgaatcagaagacc
aactttattggttttgtgatgagtaatgttctgtttgatgggccttatttttcaacgttg
atgagcaacgcagcgtcgtattgcgaggagaacagtcatcagctggtggttattgacggt
aaacacagcaaagcagaagagcgacatgcgattaatttgcttctggatatgaagtgcgca
ggaatcattgtttatccaaagtttctaaatgagaaagacctgggtgagatcattagcagt
actgaaacccccattgttgtattaaataagacagtctccgactatccagacaatgcagtc
actaccgaccattatcagagtgcctgtttgttgattgagcactttgttcagcaggggcat
cgggagattgcgattatccgtggcaacatcaattcagggacggataagcaacgttatcag
gcatatagagatgtacttcaaaagcatggcatcccgatcaatatagagtttgagcagcag
ggaaactggcgaccagagggtggttatgcagcagcacaagcattgctaaaggcttcccat
aaaccaaccgctgtaattgccaataacgatgatatggctataggtgctatgaaggcgttt
cagactgcggggattaaacttcctgacgatatatccatcgctggttttgataacagcaag
atgggagagtacttgtctccaggattaagtaccgtcagcgtcccgctggaaaacatgaca
aagaaagcggtattgaaagttatcggtgaacatcaaggggctcaaaagattcctgcgaat
ggagctttagtcattcgagattctatttcctgtattaaagtacgcagctgttag
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