Vibrio iocasae: SNR28_17365
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Entry
SNR28_17365 CDS
T11169
Name
(GenBank) cytidine/deoxycytidylate deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vic Vibrio iocasae
Pathway
vic00240
Pyrimidine metabolism
vic01100
Metabolic pathways
vic01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SNR28_17365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vic02044
]
SNR28_17365
Enzymes [BR:
vic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SNR28_17365
Secretion system [BR:
vic02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SNR28_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
XHF86450
LinkDB
All DBs
Position
2:complement(1652558..1653010)
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AA seq
150 aa
AA seq
DB search
MISKWAHRFYQMAELVGSWSKDPSTQVGAVITKQNRIVSVGFNGYPHGISDSAMTDEREM
KYLKTLHAEENAILFAKRDLNGCDIWVTHFPCPNCAAKIIQTGIAAVHCPEQEPDFLSRW
GDKIQISQDMFLQAGVKVNWLPLEDLNSDD
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaagtgggcccaccgtttttaccaaatggcagaacttgtaggttcctggagt
aaagacccatcaacacaagttggtgccgtcattaccaagcaaaatcgaatcgtctcagtt
ggctttaatggctaccctcatggcatctcagatagtgcgatgacggatgaacgagaaatg
aaatatcttaaaactctacatgcggaagaaaatgccattcttttcgctaaaagagacctg
aatggctgtgatatttgggtaacccattttccttgtccaaactgcgctgcaaaaataatc
caaaccggtattgctgcagtacattgcccagagcaagagcccgattttctctctcgctgg
ggtgacaaaattcaaatcagtcaggacatgtttcttcaagcaggggtgaaggtaaactgg
cttccactggaagatctgaacagcgacgattaa
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