Vibrio iocasae: SNR28_18295
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Entry
SNR28_18295 CDS
T11169
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vic Vibrio iocasae
Pathway
vic00330
Arginine and proline metabolism
vic00480
Glutathione metabolism
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
vic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SNR28_18295
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SNR28_18295
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SNR28_18295
Enzymes [BR:
vic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SNR28_18295
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ribosomal_L32e
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XHF83428
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Position
2:1883340..1884536
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AA seq
398 aa
AA seq
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MAHAALDFSAFSPPVLNTEETQLIESSVRQFGSPLLLLDCNVVREQYRALKAALPNVTLH
FALKPLPDPAVIRTLLSEGACFDLATSGEVDLVASQGVPAEKTIHTHPIKRDQDIQDALD
YGCRVFVVDNINELEKFLRYKDRAEILVRLSFRNEEAFADLSKKFGCSPDLAIEIISRAK
DLGIYIKGLSFHVGSQTTNPNKYVDAIGVCCNLMNKVVSLGLPALSMLDIGGGFPVCYSK
QVPSIDEFCKPINEAISNLPETVSVIAEPGRFIVAQSVMSIASVMGQAERDGRTWYYLDD
GIYGSFSGLMFDEAEYPILTIKQSTLCYTSVLAGPTCDSIDIVAEEIMLPKLENGDLIVG
RMMGAYTSATATDFNFFKRAKTVVLNEFSDNKILLLSE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgcagcgttagatttttcagctttttctcctccagtactcaatactgaagaa
actcaattaatcgaatcttctgtaagacaatttggctctccgttgctacttctagactgt
aacgtagtacgggaacaatatagagcacttaaagctgctctaccgaatgtaactttgcac
ttcgctttaaaaccattaccagatcctgctgttataagaacattgctgtctgaaggtgcg
tgttttgatctcgctacatctggtgaagttgacctcgttgcatcccaaggagttccagca
gaaaaaaccattcatactcacccaattaaaagagaccaagatattcaggatgctctagac
tacggatgcagggtatttgtcgttgacaatattaacgagctagagaagtttcttcgttat
aaagaccgtgctgaaatcctagttagattgagttttagaaatgaagaagcgtttgcggac
ttgtccaagaagtttggatgcagccccgatctcgccatcgaaatcatatctcgagccaaa
gacctaggtatttatatcaaagggctatcattccatgttggttctcaaacaacgaatccg
aataaatacgttgatgctattggtgtatgttgtaatttaatgaacaaagttgtttcatta
ggattgccagcacttagcatgttagatatcggaggcggatttcctgtatgttactcgaaa
caagttccctcaatagacgagttctgtaaaccaattaatgaagcgatatctaaccttcca
gagacagtatcggtcattgcagaacctggacgttttattgtcgcacaatcagtaatgagc
attgcttctgttatgggacaggctgaaagagatggtagaacctggtattacttagatgat
ggaatttatggttcttttagcggcttaatgtttgatgaagcagagtatcccattctaaca
atcaaacagagtacactttgttacacaagcgttttagcagggccaacatgcgatagcatt
gacatagttgctgaagaaatcatgttaccgaagctagaaaacggagatttgatcgtgggt
cgtatgatgggtgcttatacgagtgcaacagcaacagacttcaacttctttaaacgagca
aaaacagtcgttttgaacgagttctcagacaataaaattttactcttaagcgaatag
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