Vibrio iocasae: SNR28_18440
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Entry
SNR28_18440 CDS
T11169
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vic Vibrio iocasae
Pathway
vic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SNR28_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_18440
Enzymes [BR:
vic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SNR28_18440
DNA repair and recombination proteins [BR:
vic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SNR28_18440
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XHF83456
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Position
2:complement(1912319..1914055)
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AA seq
578 aa
AA seq
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MNPAESGHQGISSQSLTQLLTHVGAVLRRDFNGRYWITAELVKTNRNQSGHVYLELSDTN
EGGQTAKARAVIWSNRTGIIGKFEKETKVRFAPHLSVMLLVEVQFNPQFGMNLIVVDINS
SFTVGAFELKLQMIREHIKELGEEELNKNLRSPQEFTRVAVVAPANAAGLGDFRSKADML
QHHGLCHFDYFTAVFQGQQRLNSIPLAINELIRNDHNYDVVCLIRGGGDKAGLNELSESK
LVRSVCRCKYPVYTGIGHKEDSVLLDEYAHRSFGTPSMVINHIQQTIIQNALESREAFLR
LKAKAESLCGHQKQIHQQDLHRIKTGQVSVLSYWKNYIGQLGDRLFANSKQKIGDSKFKV
TENLQSLLISGKHHVNVQRLELRDYQQASIRYAHQNIQDAKATVVSNHELLNSSSKYSLA
SAKQDVTSSLSHLKLNSTKLLEKQKQDTRQIWLNMSQSAKNNIQTARYQAIDTAKLLALH
GQRHSNHQRQVLNQYHGELLLSAQRNIRINKQELVSEFRLIDAYDPQKVLERGYAIVYSH
EGGVVKHVGQFSKGQEYQVQLQDGNVSLINQPVNTGEE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgctgaatctggtcaccaaggcatttcaagtcaatctcttactcaactcctt
acacatgttggggctgttttgcgacgtgattttaatggccgatattggattacagcagag
cttgtaaagaccaacagaaaccaatctggtcatgtttatctcgagctttctgatactaac
gaaggtggtcaaactgctaaagcaagggctgtgatatggtctaaccgtactggaattatt
ggtaagtttgaaaaagagactaaagttcgattcgcgccccatttaagtgtgatgctactg
gtggaagttcagtttaatccacaatttggaatgaatctgatcgttgttgatattaactca
agctttacggtgggtgcgtttgaattaaaacttcaaatgattcgggagcacataaaggag
ttaggtgaagaagaactaaataagaatttaaggtcacctcaggaatttacaagggttgct
gttgttgctccagcgaatgctgctggcttaggggatttcaggagtaaagcagatatgctt
cagcaccatggactttgtcattttgactactttaccgctgtttttcagggccagcaaagg
ttgaactcaattccattggctattaatgagctcattcgtaatgatcataactacgatgta
gtttgtttgatccgaggtggtggtgacaaagctggtcttaatgagcttagtgaatcaaag
ttagtccgatcagtctgtagatgtaagtaccctgtgtatactggtattggacataaagaa
gatagtgtgttgcttgatgaatatgctcatcgttcgttcggcacaccatcgatggttata
aaccacattcagcagactattatccaaaatgctttagaatcgagagaggcatttcttagg
ttgaaagcgaaggcagagtccctttgcggccatcaaaaacagattcatcagcaagatttg
caccgtataaaaactggacaagtttcggttttatcctactggaaaaattatattgggcaa
ttaggtgaccgtctgtttgcaaactcaaaacaaaaaattggtgacagtaagtttaaggta
actgagaatttacagtcattgcttatcagtggtaaacatcatgttaacgtacagcgattg
gagcttcgggactatcagcaagcttcgatccgctatgcgcaccaaaatattcaagatgcg
aaagctactgttgtaagcaatcacgagctattgaactcatccagtaagtattcgttagcc
tctgcgaagcaagacgtaacatcatcattaagtcacttgaagctcaactctaccaagctt
ctagagaagcaaaagcaggacactcgtcagatttggctcaatatgagccagtctgcaaag
aacaatattcaaacggctcgatatcaagctattgatacagcaaagcttttagctctccat
gggcaaaggcattctaatcatcaaagacaagttcttaatcaataccatggtgagctactt
cttagtgctcagcgaaacatcagaataaataaacaagagctggttagcgagttcagactc
atagatgcttatgatccacaaaaggtattggaaagaggctatgcgattgtgtatagccat
gaaggaggtgtggttaagcatgttggtcaatttagtaaaggacaggagtatcaagtgcag
ctacaggacggtaatgtttctttgataaatcagccagttaatacaggagaagagtaa
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