KEGG   Vibrio iocasae: SNR28_18470
Entry
SNR28_18470       CDS       T11169                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vic  Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:vic00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vic02048]
    SNR28_18470
Enzymes [BR:vic01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SNR28_18470
Prokaryotic defense system [BR:vic02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SNR28_18470
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII PIN_8
Other DBs
NCBI-ProteinID: XHF83462
LinkDB
Position
2:1919785..1923057
AA seq 1090 aa
MSNVLPNFREEQSAKIPALTLLTNLGYQFIPPTECVAKRGNLSTVILPDVLRNVLKHKNY
SFMGKEHKLSEAAIDKIVQELANPAMNEGLKAANEKLYDALTYGISVTEFIDGKKANSTI
HVIDWETPANNQYHFTEELEVENAHGTGKRIPDIVCFVNGLPWVVIEAKRPDSSHEGKPT
VPEGISQNIRNQKVDEIPHLFAYSQLLLSVNGHEGLYATCGTPEKFWAKWKEEEITEATF
SRLKNSPLSQKQLEAIFDHRPGKVLDEYLSLIAGGELIVTDQDRLLVSLLRHDRLLEMAR
LYTLFDKKAGKIVARYQQVFGIKALIDRVTSFDDQGARNGGVIWHTTGSGKSFTMVFLSK
ALIWLKELTKCRVVVVTDRVDLEDQLARTFASGGALSEKDKKHAMATTGRRLAEQIGKGN
ERIIFSIINKFGTAIELPECYNDSADIIVLVDEGHRSQNGENNIRMQQALPKAAYIGFTG
TPLLQDDKTENKFGKIIHSYTMQQAVEDKTVTPLLYEERIPDLSTNDKAIDAWFDRITDK
LSEKQRTDLKRKFSQKGQVYQVEGRLELIAHDISDHFQNFKQQRLKGQLACDSKASAIQY
KKLLDDIGKVTSVVAMSPPDTREGHDTVDGESKDLVQNWWKENVGNQDEKVYTKHIIEEF
GKDDGPDIMIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHQQKQFGYLIDY
RGILKELDATIADYQDLAERTQGGFDIDDLKGLYSRMDTEYKKLPGLYADLWAIFDGVKN
KQDGQALRQVLAPKIDTIDGQLTDTNQKKRDDFYSALTAFANCLKVALQSATYFEDKSFD
DKRDLYKKTLKTMSELRKQVREDAEETVNYDEYAENIRTMLDKHIGGVEIQEPEGAYLVG
NMGKAPHPEEMSDDEARNKKDAITGRITKMIDQDLADDPYAQEYFSRLLKQAIEQTKEMF
DAPVKQYLLFADFEEQVKERKVDGIPTDCFSDLDPKVKRHVQSYYCLFPHHFGDDNPLSE
DDCFNYAIQIDEIVTAAVAEFSINPQEIENQINRKLLPLLFKDAGLGMDKTKAIIADIIQ
ITRLGVSGHH
NT seq 3273 nt   +upstreamnt  +downstreamnt
gtgagtaatgtattacctaatttccgtgaagaacaaagtgccaagattcctgctcttaca
cttctaacaaatcttggctatcagttcattccacctacagaatgcgttgctaaacgaggc
aacctatcaacggtgattttgccagatgttctgcgaaatgtgctcaagcacaaaaactac
agttttatgggtaaagagcacaaactctcagaagcagctatcgataagatagttcaggaa
ttagccaatccagctatgaatgaaggtctgaaagccgctaatgaaaagctatatgatgcc
ctaacctacggcataagcgtcaccgagtttattgatgggaaaaaggcaaactcaactatc
cacgtaattgactgggaaacaccagcgaataaccagtaccacttcacggaagagctggag
gttgagaatgcacatggaacgggtaaacgaattcctgacattgtttgttttgtaaatggc
ctgccttgggtagtcattgaagccaaaaggcctgattcgtctcatgaaggtaagccaact
gtcccagaaggtatttcacagaacattcgcaatcagaaagttgatgagatccctcattta
ttcgcttatagccagttgctgctttctgtaaacggtcatgaaggcctttatgcaacttgc
ggtactccagagaagttttgggcgaagtggaaagaagaagaaattaccgaagctactttt
tctaggttgaagaattcacctttaagccagaagcagttagaagctatttttgaccaccgc
ccaggtaaagtactggacgaatacctaagcctcattgcaggcggtgaactaatcgttacc
gaccaagatagacttcttgtatccctactccgccatgaccgccttctagaaatggctcgt
ctgtataccttgtttgataagaaggctggcaagattgtcgctcgctatcagcaagtgttc
ggaatcaaagctctgattgatcgtgtgacatcgtttgacgatcaaggtgcccgtaatggt
ggcgtgatttggcataccactggctctggtaaatccttcaccatggtatttctctccaag
gcacttatctggctaaaagagctaacaaagtgtcgtgttgtggtagtcactgaccgcgta
gatttggaagatcagttagccagaacctttgcctcaggtggagccttatcggaaaaagat
aaaaagcatgcaatggctacaacaggccgccgattagcagagcaaatcggcaaaggtaac
gagcgcatcatcttctctatcatcaataagttcggtacagcgatagaattgcctgaatgt
tataacgacagcgctgacatcattgtgttagtcgatgaagggcaccgtagccaaaatggt
gaaaacaacatccgcatgcagcaagcattgcctaaagctgcgtacattggattcactggt
actcccctactccaggatgataaaaccgagaacaagttcggaaagatcattcactcttac
actatgcagcaagccgttgaagataaaaccgtaactccccttctttatgaagagcgtatt
cctgatcttagcactaatgacaaagccattgatgcttggttcgatcgaattactgacaaa
ctttccgaaaagcagcgcactgacctgaagaggaagttctcacagaagggccaggtgtac
caggttgaaggacggctggaactaatagcccacgacatctcagatcatttccagaatttc
aaacaacagcgtttgaagggccaactagcatgtgactccaaagcctctgcaatccaatac
aagaagctgttggatgacattggcaaagtgacgtctgttgtcgctatgtctcctcctgac
actcgtgagggtcatgataccgttgacggtgaaagcaaagatctggtgcaaaattggtgg
aaggaaaatgtcgggaatcaggatgaaaaagtctataccaaacacatcattgaagaattt
ggtaaagacgatggccctgacattatgattgtagttgataagcttcttactgggtttgat
gagcctaagaacaccgtactatacatcgataagccgttaaaacagcataacctcatccag
gctattgctcgagtaaacagactccaccagcaaaaacaatttggttatctaatcgattat
cgaggcatcctgaaagagctggatgcaacaattgctgattatcaagatttggcagaacgt
actcaaggtggttttgatatcgacgatctgaaaggtttgtatagccgaatggatactgag
tacaagaagctaccaggactctatgccgacctatgggctatcttcgacggagtgaagaac
aaacaagatggccaggcacttcgccaagttctagctccaaaaatcgatactatcgatggt
cagcttactgatacgaaccagaaaaagcgcgacgacttttactcagccctaaccgcattt
gctaactgtttgaaggtggctcttcaatcagcaacgtacttcgaggataagagttttgac
gataaacgagacctctacaaaaagactctcaaaaccatgtcagaacttcgtaagcaagtt
cgtgaagatgcagaagaaaccgttaactacgatgagtatgcggaaaatattcgaactatg
ttggacaaacatattggcggcgtagagattcaagagcccgaaggtgcttatcttgttggc
aatatgggtaaagctcctcatcctgaagaaatgagtgatgatgaagcgcgtaacaagaaa
gatgcaataactggccgtatcactaagatgattgaccaggatttggctgatgacccttat
gctcaagagtacttctcaaggttgctgaagcaggcgattgaacagactaaagagatgttc
gatgctcctgttaagcaatacctgctatttgctgatttcgaggagcaggtaaaagaacgc
aaagttgatggtatcccaaccgactgcttcagtgatctagatcctaaggttaagcgtcat
gtacagtcttattactgtttgtttcctcatcactttggcgatgacaatccactatctgaa
gatgattgcttcaattacgcaattcaaatcgatgagattgttacggctgctgttgctgaa
ttttcgattaatcctcaggagatagaaaatcagatcaaccgtaaattgttaccactgttg
tttaaagatgctggacttgggatggataaaaccaaagccatcattgcagacattattcag
atcacccgtctgggcgtgtcaggtcatcactaa

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