KEGG   Vibrio iocasae: SNR28_18825
Entry
SNR28_18825       CDS       T11169                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vic  Vibrio iocasae
Pathway
vic03030  DNA replication
vic03430  Mismatch repair
vic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SNR28_18825
   03430 Mismatch repair
    SNR28_18825
   03440 Homologous recombination
    SNR28_18825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vic03032]
    SNR28_18825
   03400 DNA repair and recombination proteins [BR:vic03400]
    SNR28_18825
Enzymes [BR:vic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SNR28_18825
DNA replication proteins [BR:vic03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SNR28_18825
DNA repair and recombination proteins [BR:vic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SNR28_18825
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: XHF86640
LinkDB
Position
2:1998907..1999626
AA seq 239 aa
MMKLFSKQQAMNWPEHYDNALKGAKDDRLVSFYGQGVISPDTPLAQVEFVALDFETTGLD
HEKEDIISIGLVPFNLNRIFLRQKKHWIVNPNRPLEEDSVVIHGITHSDIVDAPDLTRVL
EEVLEALAGKIVVVHYKRIERNFLNKAMKDRIGEGILFPVVDTLEIETIIQQKQTKGLLN
QLKGKKPQSVRLGRSRQRYGLPIYPPHHALTDAIATAELLQAQVAYHYAPDMPISEIWG
NT seq 720 nt   +upstreamnt  +downstreamnt
atcatgaaactatttagtaaacaacaggcgatgaactggcctgagcactatgacaacgca
cttaaaggtgcgaaagatgatcgccttgtgagcttttatgggcaaggagtaatctcacca
gatacgcctctggcacaagttgagtttgttgcattggatttcgagacaacgggtctggat
catgaaaaggaagacattatcagcataggtctggtgccatttaatctgaacagaattttc
ctgaggcagaaaaagcactggattgtaaatcctaaccggccattggaagaagattccgtt
gtcatccacggaattactcatagtgacattgtcgatgcccctgatcttacgcgtgttctg
gaggaagtattagaagctctggccggtaaaatcgttgtggtccactacaaacgtatcgaa
cgaaactttctcaataaagcgatgaaagatcgtatcggtgaaggcattttgtttcctgtc
gttgatacgcttgagatagaaacgattattcagcaaaaacaaacaaaaggcttgctgaat
caactaaaaggaaagaaacctcagtccgtcagacttggacgaagccgtcaacgttatggt
cttcctatctaccctcctcatcacgcactgacagatgcgatagcaacagcagagttacta
caagcacaagtcgcgtatcactatgctcctgacatgccgatcagtgaaatttggggataa

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