Vibrio iocasae: SNR28_18850
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Entry
SNR28_18850 CDS
T11169
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
vic Vibrio iocasae
Pathway
vic02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SNR28_18850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_18850
Transporters [BR:
vic02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SNR28_18850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
CitMHS
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
XHF83535
LinkDB
All DBs
Position
2:complement(2004490..2005773)
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AA seq
427 aa
AA seq
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MIGIVMFFVALAALLLGFPVAFTFGGIALLFGVWAEGPEMFAFMPYRIQSIMENTVLMAV
PLFVFMGLVLQKTKLAEQLLESMGRLFGTVRGGIAISTVLVGALLAASTGVVGASVVAMG
LISLPVMLKYNYNKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAAIWPGV
VLVGAYILYILIYAKLNPEAAQPIERDESISRREEVITALKAVIPPLALIVVVLGSIFAG
VATPTESAALGGAGAIMLSFLYRSFSWKMVYDASKETVKVTAMVFAILLGATAFSMAFTY
TGGDLLVEEWMFEIPGEKWGFLIIVMLVILILGFFIDFVEICFIIVPIIAPVAELMGIDM
VWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKGVTTGDIYRGVMPFIAIQVAVLATLLL
FPGFYGM
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaattgtgatgttttttgtcgctctggcagcccttttacttggtttcccagtg
gcatttaccttcggtggtattgcactgctgtttggtgtctgggctgaaggccctgagatg
ttcgcctttatgccgtatcgtatccagtccatcatggaaaacacggtattgatggcggtt
cctctgtttgtctttatgggcttggtactgcaaaaaaccaagctggctgagcaactacta
gagtccatggggcgcctgtttggtacggttcgtggtggtatcgctatctcaacggttctg
gttggcgcattgcttgcggcatcaacgggtgttgttggcgcttctgtagttgcaatgggg
ttaatctcactgcctgtcatgctgaagtacaattacaacaaaggattagcctgcggaact
atctgtgcttcgggaacattaggacagattattcctccttccatcgtgttgatccttttg
ggtgatgttctgggtgtaccagtaggtgacttgttccaggctgctatctggccgggtgtc
gtgcttgtaggcgcttatattctctatatcctaatttatgcgaagttaaatcccgaagcg
gcacaacctattgaacgtgatgagtctatttctcgacgtgaagaagttattactgcgcta
aaagctgtaataccaccattagctctgattgttgtcgttttaggttcgatatttgcgggt
gtggcaacaccgaccgaatcagcggcattgggtggtgcaggagcaattatgctttcgttt
ttataccgctcctttagctggaaaatggtctatgacgcatcgaaagagacggtgaaagta
accgcgatggtatttgccatacttctgggtgcaacagcgttctcgatggcgtttacctac
actggcggtgatctgctcgtggaagagtggatgtttgagataccgggcgagaagtggggc
ttcctcatcatcgtaatgctggttattctgattcttggcttctttatcgatttcgttgag
atctgttttattatcgtgccaataatcgcacctgtcgcagagttgatgggaatcgatatg
gtttggtttgcaattttgattgcgatgaaccttcaaacctccttcctgaccccaccgttt
ggatttagtctgttctacttgaaaggagtggctccgaaaggtgttacgacaggtgatatt
tatcgtggagtgatgccatttatcgctatacaggttgctgtactggcaacattgctgctg
ttcccaggattttacggaatgtga
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