Vibrio iocasae: SNR28_18880
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Entry
SNR28_18880 CDS
T11169
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vic01002
]
SNR28_18880
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vic01011
]
SNR28_18880
Peptidases and inhibitors [BR:
vic01002
]
Cysteine peptidases
Family C82
SNR28_18880
Peptidoglycan biosynthesis and degradation proteins [BR:
vic01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SNR28_18880
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
XHF83541
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Position
2:complement(2009805..2011364)
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AA seq
519 aa
AA seq
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MKKGCLFLLTIIVSVNAYAFEKFHELGWVQPGSPLEVMLSNKQELTNIYEGQGYQLIWFN
PEVAQLFEDQLSILHYSEISPYFSFRYQKLKEYRQNHQLFEYDLLATDTLVSYVSYSKSA
EKEGNKWYFNGSVELPLSGFVKNDLTFLRNVVSSKALKNYLSMHAPANFAFYRQAMIRLE
EHSSQQGKQDYIQRGIKKKGDKLEDKTTLVTKLSAVGLPVASIDTGNQLFDSKLSLVIKT
FQKQHGLKSDGVIGSDTMYWLNLPYEERLRILALNSERTRLVPKERESLIVVNVPNFRMS
YWYDGEPVFHSKVIVGKRSRKTPLLDIKLDSMIVNPTWNVPKKLVYKDILPKVKRDNTYL
QTHNFKVLKNGYFGEEVDPSTINWDKVSVHQHFPYQLRQDAGALNALGRYKFNTPNNRAI
YLHDTPTKYLFDRDSRAFSSGCIRVQYADQFANVLLKTQGIDDKQDALNQAEQKLLIPMK
KPIPVKIVYQTAWYQSGYINYRKDIYSYDTGVKELAKKD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaaggttgcctgtttctactaacaataatagtttctgttaatgcttatgcattt
gagaagtttcacgaacttgggtgggttcaacctggtagcccacttgaagtaatgctgtca
aacaaacaagagcttaccaatatctacgaaggtcagggttaccaacttatctggtttaac
cctgaagtcgctcagctattcgaagatcagctatctattcttcattattccgagatcagt
ccttatttttcatttcgctatcagaagttaaaggaataccgacagaatcatcagctgttt
gaatatgatcttttagcaacggatacgttagttagctatgtgtcctattccaagagcgca
gaaaaagagggtaacaaatggtatttcaacggctcggtagagttaccactgtctgggttt
gtgaagaatgatctcacttttttgcgcaacgtagtcagtagcaaagcgctaaaaaattat
ctttccatgcatgcaccagcaaattttgctttttatcgtcaggcaatgatacgtcttgaa
gagcactcatctcagcagggcaaacaagattacattcaacgcggcatcaagaaaaaggga
gataagctagaggataaaacgactcttgtaactaagttaagcgctgtgggtttgcccgtt
gccagcattgatacagggaatcagctatttgatagcaagctatcacttgtgattaaaacc
ttccaaaagcaacatggattaaaaagtgatggtgtcattggctcagataccatgtactgg
ctcaatcttccttatgaagagcgcttgcggattttggcattaaatagtgaaagaaccagg
ctggtgcctaaagaacgtgaatctcttattgtggtcaatgttccaaactttcgtatgtca
tattggtatgacggtgagccggtttttcattctaaggtaattgttggtaagcgcagcaga
aaaacacctctgctcgatatcaagttggactccatgatagtaaacccaacctggaatgta
cctaagaaactggtttataaagatatcctgcctaaggtaaagagagataatacttatctg
caaacacataactttaaggtgttaaagaacggttattttggtgaggaagttgacccaagc
accatcaactgggacaaagtttccgttcatcagcatttcccttaccagttacgtcaggat
gcgggtgcgttaaatgctcttggcagatacaagttcaatacaccaaacaaccgagccatt
tacttacacgacaccccaaccaagtacttgtttgatagagatagcagggcattcagttcc
ggttgtatacgagttcaatatgctgaccagtttgctaacgtgttgctaaagactcaggga
atcgatgataagcaagacgctctgaaccaggctgaacagaagctactgattccaatgaag
aaacccattccggttaaaattgtctatcaaacagcctggtatcaatctggatatatcaac
taccggaaagatatctacagctacgatacaggtgttaaagagctggctaaaaaggattga
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