Vibrio iocasae: SNR28_20195
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Entry
SNR28_20195 CDS
T11169
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13652
AraC family transcriptional regulator
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vic03000
]
SNR28_20195
Transcription factors [BR:
vic03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SNR28_20195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
GyrI-like
HTH_AraC
Cass2
HTH_71
Motif
Other DBs
NCBI-ProteinID:
XHF83789
LinkDB
All DBs
Position
2:2322719..2323618
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AA seq
299 aa
AA seq
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MKTNYDQKLKPVIRYLEKNYNSSLNLEEVAGLASLSPYHFHRVFKAVTGETLNEYLRRLR
LQQAAQDLFYKKPPIVDVALEFGFSSSQNFAKAFKKYYALSPTDIRECTSIEHFAAMTRK
SKIGNTLRKNGNATFDESSYTTSKPKQRRITMERTTFEKCNLAYIRVTGPYGENYEPAVG
KLYQWATAEGVADATCIFIYHDNPEVTPADKCRTDICLMLSDDVKVYGDVELQEFPGGEY
GTMRTTITDKSQYAEAWNEHISQIVELELEMDERPCFELYHSYDKETDTSDVSFCSALK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaattacgatcaaaagttgaaaccggtaatccgctacttagagaaaaactac
aactcttcgctcaacttagaagaagtagcagggttagcctcactctctccttaccatttc
catcgagtgtttaaggcggtaaccggggaaacgttaaatgaatatctgcgtcgcctcaga
ctacagcaggcggcccaggatctattctataaaaaaccacctattgtggatgtcgcactt
gagtttggattttctagttcgcaaaactttgccaaagcttttaaaaaatattacgccctc
tccccaactgacatccgggaatgcaccagcattgagcattttgcggctatgacgagaaag
agcaagataggaaacacactgcgcaaaaatggaaacgcgactttcgatgagagttcatat
actacctctaaacctaaacagaggagaatcaccatggaaagaaccacttttgaaaaatgc
aatctggcgtacattcgtgtaacaggcccttacggtgagaactacgaaccagctgtcgga
aagctttatcagtgggcgacggcagaaggtgttgctgatgcaacctgtatatttatctac
catgacaatccggaagtgacgcctgcggataagtgccgaacagacatttgcctgatgtta
tctgacgacgtgaaggtttatggagacgtagaacttcaggagtttcctggtggtgaatat
ggaacgatgagaacaaccatcactgataaatctcagtacgctgaagcatggaacgaacac
atatcacaaatcgttgagctagaactggaaatggatgaaagaccttgtttcgagctctac
cacagctatgacaaagaaaccgatacaagcgatgttagtttctgtagcgcattgaaataa
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