Vibrio iocasae: SNR28_20755
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Entry
SNR28_20755 CDS
T11169
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vic Vibrio iocasae
Pathway
vic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNR28_20755 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_20755 (uvrB)
DNA repair and recombination proteins [BR:
vic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNR28_20755 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNR28_20755 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XHF83891
LinkDB
All DBs
Position
2:complement(2433788..2435818)
Genome browser
AA seq
676 aa
AA seq
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MSKEYELVSDYQPSGDQPAAIEQLLDGLDSGLAHQTLLGVTGSGKTFSLANVIAKAKRPA
ILLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALIERKDAIIVASVSAIYGLGDPDSYLKMMLHVTRGDVINQRDILRRLAELQ
YSRNDVTFERGQFRVRGEVIDIFPAESDQDAVRLEMFDDEVECISLFDPLTGAVTQRDLP
RYTVYPKTHYVTPRERILEAVENIKVELKDRQTYLKDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPNDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSSGEVADQVVRPTGLL
DPELEVRPVATQVDDLLSEIRIRAAKEERVLVTTLTKRMAEDLTEYLHEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLQGKAILYADSITGSMKRAMDETNRRREKQRAYNEERGIQPQALKRNIKDIMEI
GDIAKSRKQKTSKAVPLSKVAEPSNSYDVLSPQQLDKEIQKLESEMYQHAQNLEFELAAE
KRDRIENLKKQFIQNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaatacgaattagtttcagactatcagccctcgggtgatcagcctgctgcg
atagagcagcttttggatggattagattctggtttagctcaccaaacgctacttggtgtt
acgggatcgggtaaaacattttcattagccaatgttattgcaaaagcgaaacgaccagcg
attcttcttgctccaaacaaaacattggctgcacagctatatggtgagatgaaggcgttc
tttcccaataacgcggtagagtattttgtctcttactacgattattaccagcctgaagct
tatgtgccgacgacggacacgtttatcgagaaagatgcttctgtaaacgcacatatcgag
caaatgaggctttctgcaaccaaagctttgattgagcgaaaagatgccattatcgtggct
tcagtttcggctatttatggtttgggtgatcctgactcttatctgaaaatgatgcttcat
gtcaccagaggagatgtcatcaaccagcgtgatattcttcgccgacttgctgagcttcaa
tacagtcgaaatgatgtcacttttgagcgtggacagtttcgcgtcagaggggaggtgata
gatattttccctgctgaatccgatcaggatgcggtaaggctggaaatgttcgatgacgag
gttgaatgtatcagcttgtttgatccgctaacaggagctgtgacgcaacgtgatttacct
cgttatacggtttatccgaaaactcactatgtgacgcctcgtgagcgtattctggaagct
gttgaaaacatcaaggtagaacttaaggacagacagacttacctgaaagacaataataag
ttattggaagaacaacgcatttcgcaaagaacccagtttgatatcgaaatgatgaatgaa
cttggtttctgttctggcattgagaactactcacgttatttgagtggtcgtgctgagggt
gagccgccaccaacactgtttgattacctacctaacgatggcttactaatcattgatgag
tctcacgtgaccgtacctcagatcggagccatgtataagggtgaccgctctcgtaaggaa
acgcttgtagagtttggatttagactaccttctgcattggataacaggccgttaaagttt
gaagagtttgaagctctcgcgcctcagacgatttttgtttcagcaacgccaggtaactac
gagcttgaaaagtccagtggtgaggttgccgatcaggtggtaaggccgacaggattgctt
gatcctgaacttgaggtgcgaccggttgctacacaggtcgatgatttgttatcagagatt
cgcattcgtgcagcaaaagaagaacgagtgctggttacaacactgactaagcgtatggct
gaagatcttaccgagtatcttcacgagcatgatgtaaaggtgcgttaccttcattcagat
atcgacaccgtggaacgagtggaaatcatacgtgacttgagacttggtgagtttgatgtg
ttagtgggtattaacttactccgtgagggtcttgatatgcccgaagtttcgctggtagcg
attcttgatgcagataaagagggctttctccgttctgagcgctctttaattcagacaatc
ggtcgtgcagcacgtaacttacaaggtaaagccatcttgtatgcggactccataactggc
tcaatgaaaagagcgatggatgaaactaaccgcagaagggaaaaacagcgagcatataac
gaagaacgaggtattcagcctcaggctctgaagcgtaatatcaaagacatcatggaaatt
ggagatattgcgaaatcgagaaaacagaaaacaagtaaagctgttcctctatctaaggtg
gctgaaccttctaatagctatgacgtactatctcctcagcaactggataaagagattcaa
aagcttgaatctgaaatgtatcaacatgctcagaacctggagtttgagcttgctgctgag
aaaagggacagaatagaaaacttgaaaaagcagtttatacagaatagttaa
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