Vibrio iocasae: SNR28_22575
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Entry
SNR28_22575 CDS
T11169
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vic Vibrio iocasae
Pathway
vic03030
DNA replication
vic03430
Mismatch repair
vic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNR28_22575 (dnaQ)
03430 Mismatch repair
SNR28_22575 (dnaQ)
03440 Homologous recombination
SNR28_22575 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vic03032
]
SNR28_22575 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_22575 (dnaQ)
Enzymes [BR:
vic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SNR28_22575 (dnaQ)
DNA replication proteins [BR:
vic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SNR28_22575 (dnaQ)
DNA repair and recombination proteins [BR:
vic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SNR28_22575 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XHF84231
LinkDB
All DBs
Position
2:complement(2792377..2793120)
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AA seq
247 aa
AA seq
DB search
MNTSNNLKHDRIVVLDTETTGMNREGGPHYMGHRIIEIGAVEIVNRKLTGKHFHCYIKPD
REIQPDAIEVHGITDEFLTDKPVYADIHKEFLEFIDGAELVAHNAPFDTGFMDHEFSMLD
ASIGKTDNYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLQFNAQSQGDGDVGSEAIKRAVGGRKALKVLRASADELDAHSKRLDIVEKG
GNCLWRQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcaacaatttaaagcacgatcgtatagtcgttctcgataccgaaacaacc
ggtatgaaccgagaaggtggcccacattatatgggacaccgaattatcgaaattggtgcg
gtagagatagttaatcgtaaattaacgggtaaacacttccactgttacattaagccggac
agagaaatacagccggatgcaattgaagttcacggtattaccgatgaatttctgactgac
aagccggtttatgccgatattcacaaagagtttctggagtttatcgacggagccgaactg
gttgcccataacgcgcccttcgataccggtttcatggatcatgagttctcaatgctggac
gcttccattgggaagacagacaactattgtaaggttaccgatacccttgccatggcgaag
aaaatcttccctggtaagcgaaacaaccttgacgttttgtgtgaacgatacggtatagac
aactcgcatcgaactctccacggggctttgctcgatgccgagattctggcagatgtttat
ctgttgatgacgggtggtcagacatcgctgcagtttaatgcacagtctcagggcgatggt
gatgttggttccgaagcgataaaacgcgcggttggtggaagaaaagcgctaaaggtttta
cgcgcctctgccgatgaattagatgcgcactctaagcgtttggatattgtagaaaaaggc
ggaaactgtctctggagacagtaa
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