Vibrio iocasae: SNR28_23020
Help
Entry
SNR28_23020 CDS
T11169
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vic03016
]
SNR28_23020 (truB)
Enzymes [BR:
vic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SNR28_23020 (truB)
Transfer RNA biogenesis [BR:
vic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SNR28_23020 (truB)
Prokaryotic type
SNR28_23020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XHF84318
LinkDB
All DBs
Position
2:complement(2894938..2895876)
Genome browser
AA seq
312 aa
AA seq
DB search
MARRRKGRPVNGVVLLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVKVDRGQLERCIAKFRGTTDQ
IPSMFSALKYQGKPLYEYAREGIEVPRESRKITVYEIELLRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLSCGAHVTYLRRTGVSHYPYEKMVTIEQLEAMLEEAREQDIQPKELLDPVL
LPMDTAVQDLPEVNLIPELTDMVQHGQPVQVFGAPAEGQVRMTSGEEKLFIGVGEIDDDG
KVAPKRLVVFRD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgcaaaggtcgtccggttaacggtgttgtccttttagacaagccgaca
gggatctcttccaatgatgcgcttcagaaagtaaagcgtatctactttgcggaaaaagca
ggtcatactggtgcgcttgatcctctggcaaccggcatgctgccaatctgtcttggggaa
gcaaccaagttttcacagttccttctggattcagataaacgctaccgcgtgatcgctaaa
ctgggtgagcgtacaaatacctcagactctgatggtgaagttgttgagactcgtccggtg
aaagttgaccgtggtcagctagaacgctgtatcgcaaagttccgtggtacaacggatcag
atcccttctatgttttctgctcttaagtaccagggtaaacctctttatgagtatgctcgt
gaaggcatcgaagtaccacgtgagtctcgcaaaataacagtttacgagattgagcttctt
cgttttgaaggtgatgaagttgagatggaagttcactgttctaagggaacttacattcgc
actatcgtggatgatcttggtgagatgctgagctgtggcgcacatgtaacttaccttcgt
cgtactggtgtatcacactatccttacgagaagatggttacgattgaacagcttgaggcg
atgcttgaggaagcaagagagcaggatatccagcctaaagagttgttggatccggttctt
cttcctatggacactgcggtgcaggatctaccggaagttaacctgattcctgaattaaca
gatatggttcagcacggtcagccagtgcaggtgtttggtgcacccgctgaaggtcaggtt
cgtatgacctcaggtgaagagaagctgtttatcggagtcggtgaaatcgatgacgatggc
aaggtagcaccgaaaaggctggttgtatttagggactag
DBGET
integrated database retrieval system
