Vibrio iocasae: SNR28_23035
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Entry
SNR28_23035 CDS
T11169
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vic03021
]
SNR28_23035 (nusA)
03009 Ribosome biogenesis [BR:
vic03009
]
SNR28_23035 (nusA)
Transcription machinery [BR:
vic03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SNR28_23035 (nusA)
Ribosome biogenesis [BR:
vic03009
]
Prokaryotic type
rRNA transcription factors
SNR28_23035 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
XHF84321
LinkDB
All DBs
Position
2:complement(2899262..2900749)
Genome browser
AA seq
495 aa
AA seq
DB search
MNREILAVVEAVSNEKAVPRERIFEALEIALATATKKKYEVEIEVRVEIDRKTGEFDTFR
RWMAVEEVENPTKEISLEAAQYEDETIEVGGYIEDEIDSVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGELVTGVVKKVNRDTIVLDLGNNAEAVILRDDQLPRENFRPGDRVR
GLLYKVAPEARGFQLFITRSKPEMLTELFRIEVPEIAEELIELRGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASIIVDE
DANSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVEDLEKKHQEESVASIENFM
KYLDIEQDFAELLVEEGFSTLEEVAYVPVNELLEIDGLNEEIVEELRGRAKEALTTLALA
QEESFEGLEPAEDLLGLEGLEREMAFKLAAKGVATLEDLADQGIDDLEGIEDLTEERAGE
LIMAARNICWFGEEE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagaaattttagcggttgttgaagctgtttctaacgagaaagctgttcctcgt
gagcgaatctttgaagcgcttgaaatcgcacttgcgactgctacaaaaaagaaatacgaa
gttgagatcgaagttcgtgttgaaatcgatcgtaaaactggtgaattcgatacattccgt
cgttggatggctgttgaagaagtagagaatccaacaaaggaaatctctctagaagctgcg
caatacgaagatgaaactatcgaagttggtggttatatcgaagacgaaattgattcagta
acttttgaccgtattactactcagacagctaaacaagtaatcgtacaaaaagtacgtgaa
gctgagcgtgcacaaatcgttgagcagtttatcgataacgaaggtgagttggtaacaggt
gtagttaagaaggtaaaccgcgacactatcgtgcttgacctgggcaacaatgctgaagcc
gttatcctacgtgatgaccaacttcctcgtgaaaacttccgtccgggtgaccgtgtacgt
ggtcttctttacaaggtagctccggaagctcgtggattccagctattcatcactcgctct
aagccagagatgctaactgaactgttccgcatcgaagtgccagaaattgctgaagagcta
atcgaactgcgtggtgcggctcgtgatccaggttctcgtgcgaagattgccgttaagaca
aacgacaagcgtattgaccctgtaggtgcatgtgttggtatgcgtggtgcacgtgtgcag
gctgtatctggcgagcttggcggagagcgtattgatatcgttctttgggacgataaccca
gctcagtttgttatcaacgctatggctccggctgacgtggcttcaatcatcgttgatgaa
gacgctaactcaatggacatcgcggttgaagcagacaatcttgcacaggctattggccgt
aatggccagaacgtacgtctggcttctcagctaacgggttgggaactgaacgtaatgact
gttgaagatcttgagaagaagcatcaggaagagtctgttgcatcaatcgagaactttatg
aagtatctggacattgagcaagacttcgcagagctacttgttgaagaaggtttctcaaca
ctagaagaagtcgcttacgtaccagttaacgagcttcttgaaattgatggtctgaatgaa
gagattgttgaagagctacgtggtcgtgcaaaagaagcactgacaacattggctcttgct
caggaagaatcatttgaaggccttgagccagcagaagatctgcttggcttggaaggtctt
gaacgcgaaatggcgttcaaattagcagcaaaaggtgttgctacactagaagatttagct
gatcagggtattgatgatctagaagggatcgaagacctgacagaagagcgtgctggagag
cttataatggccgctcgtaatatctgctggtttggcgaagaagaataa
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