Vibrio iocasae: SNR28_23360
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Entry
SNR28_23360 CDS
T11169
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vic Vibrio iocasae
Pathway
vic00010
Glycolysis / Gluconeogenesis
vic00020
Citrate cycle (TCA cycle)
vic00260
Glycine, serine and threonine metabolism
vic00280
Valine, leucine and isoleucine degradation
vic00310
Lysine degradation
vic00380
Tryptophan metabolism
vic00620
Pyruvate metabolism
vic00630
Glyoxylate and dicarboxylate metabolism
vic00640
Propanoate metabolism
vic00670
One carbon pool by folate
vic00785
Lipoic acid metabolism
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
vic01120
Microbial metabolism in diverse environments
vic01200
Carbon metabolism
vic01210
2-Oxocarboxylic acid metabolism
vic01240
Biosynthesis of cofactors
Module
vic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vic_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vic_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SNR28_23360 (lpdA)
00020 Citrate cycle (TCA cycle)
SNR28_23360 (lpdA)
00620 Pyruvate metabolism
SNR28_23360 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SNR28_23360 (lpdA)
00640 Propanoate metabolism
SNR28_23360 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SNR28_23360 (lpdA)
00280 Valine, leucine and isoleucine degradation
SNR28_23360 (lpdA)
00310 Lysine degradation
SNR28_23360 (lpdA)
00380 Tryptophan metabolism
SNR28_23360 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SNR28_23360 (lpdA)
00670 One carbon pool by folate
SNR28_23360 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vic04147
]
SNR28_23360 (lpdA)
Enzymes [BR:
vic01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SNR28_23360 (lpdA)
Exosome [BR:
vic04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SNR28_23360 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
AlaDh_PNT_C
HI0933_like
FAD_binding_2
NAD_binding_8
Thi4
FAD_binding_3
DAO
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
XHF84374
LinkDB
All DBs
Position
2:complement(2976095..2977519)
Genome browser
AA seq
474 aa
AA seq
DB search
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLETVLIERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALADHGIVFGEPQTDIDKIRLWKEKVIDQLTGGLGGMAKMRNVTVVNGFGKFT
GPNSIDVEGDDGVTTVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMGTVYHSLGSQIDVVEMFDQVIPAADKDVVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLIDAEKAGLEVDERGFINVDKQ
MRTNIPHIHAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKEEGINYEVATFPWAASGRAIASDCADGLTKLIFDKDTHRIVGGAIVGTNGGE
LLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEVFEGTITDLPNKKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaggtagtagtacttggtgcaggtcctgctggttattca
gctgcattccgctgtgcagaccttggtctggaaacagtactgattgaacgttacagcacc
cttggtggtgtttgtctgaacgttggttgtattccatctaaagcactgcttcacgttgca
aaagtaattgaagaagctaaagcccttgctgatcacggtatcgtgttcggtgaaccgcaa
acagatattgataaaatccgtctttggaaagagaaggttatcgatcagctaactggcggt
cttggtggtatggctaagatgcgtaacgtaacagtggttaatggtttcggtaagtttacc
ggccctaactctatcgatgttgaaggtgatgatggtgttactactgttaacttcgacaac
gctattgttgctgcaggttctcgcccgattaaacttcctttcattccgcacgaagatcca
cgtatctgggactcaacagatgctctggagctgaaagaagttcctggaaaactgcttatc
atgggtggtggtatcatcggccttgaaatgggtacggtttaccactctctgggttctcag
attgacgttgttgagatgttcgatcaggttatcccggcagcagataaagatgtagttaag
gtttacaccaagcgcattaaagataagtttaacctgatgctggaaacaaaagtgacagca
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagaaagcaccagcagaa
gctgagcgctatgatgcggtacttgtggcaattggccgtgtgccaaacggtaagctgatt
gacgcagagaaagctggtctggaagtggatgagcgtggctttatcaatgtagataagcag
atgcgtactaacattccacacatccacgctatcggtgatattgttggtcagccaatgttg
gctcacaaaggtgtgcatgaaggtcacgtagctgctgaagttatcgcgggtaagaagcac
tacttcgatcctaaagtgattccttcaatcgcttatactgagccagaagttgcatgggtt
ggtaaaactgaaaaagaagcaaaagaagaaggtatcaactatgaagttgcgactttccct
tgggctgcatctggtcgtgcaatcgcatctgactgtgctgatggtctgactaagcttatc
ttcgataaagatactcaccgtattgttggtggtgctatcgttggtacaaacggtggtgaa
ctgcttggtgaaatcggtctagcgatcgaaatgggttgtgatgctgaagatttggcactt
actatccacgctcacccgactctgcacgaatcggtaggtttggctgctgaagtatttgaa
ggtacgatcactgaccttccaaataagaaggctaagaagaagtaa
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