KEGG   Vibrio iocasae: SNR28_23360
Entry
SNR28_23360       CDS       T11169                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vic  Vibrio iocasae
Pathway
vic00010  Glycolysis / Gluconeogenesis
vic00020  Citrate cycle (TCA cycle)
vic00260  Glycine, serine and threonine metabolism
vic00280  Valine, leucine and isoleucine degradation
vic00310  Lysine degradation
vic00380  Tryptophan metabolism
vic00620  Pyruvate metabolism
vic00630  Glyoxylate and dicarboxylate metabolism
vic00640  Propanoate metabolism
vic00670  One carbon pool by folate
vic00785  Lipoic acid metabolism
vic01100  Metabolic pathways
vic01110  Biosynthesis of secondary metabolites
vic01120  Microbial metabolism in diverse environments
vic01200  Carbon metabolism
vic01210  2-Oxocarboxylic acid metabolism
vic01240  Biosynthesis of cofactors
Module
vic_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vic_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vic_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vic_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vic00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SNR28_23360 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SNR28_23360 (lpdA)
   00620 Pyruvate metabolism
    SNR28_23360 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SNR28_23360 (lpdA)
   00640 Propanoate metabolism
    SNR28_23360 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SNR28_23360 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SNR28_23360 (lpdA)
   00310 Lysine degradation
    SNR28_23360 (lpdA)
   00380 Tryptophan metabolism
    SNR28_23360 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SNR28_23360 (lpdA)
   00670 One carbon pool by folate
    SNR28_23360 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vic04147]
    SNR28_23360 (lpdA)
Enzymes [BR:vic01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SNR28_23360 (lpdA)
Exosome [BR:vic04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SNR28_23360 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 AlaDh_PNT_C HI0933_like FAD_binding_2 NAD_binding_8 Thi4 FAD_binding_3 DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: XHF84374
LinkDB
Position
2:complement(2976095..2977519)
AA seq 474 aa
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLETVLIERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALADHGIVFGEPQTDIDKIRLWKEKVIDQLTGGLGGMAKMRNVTVVNGFGKFT
GPNSIDVEGDDGVTTVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMGTVYHSLGSQIDVVEMFDQVIPAADKDVVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLIDAEKAGLEVDERGFINVDKQ
MRTNIPHIHAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKEEGINYEVATFPWAASGRAIASDCADGLTKLIFDKDTHRIVGGAIVGTNGGE
LLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEVFEGTITDLPNKKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagcaaagaaattaaagcccaggtagtagtacttggtgcaggtcctgctggttattca
gctgcattccgctgtgcagaccttggtctggaaacagtactgattgaacgttacagcacc
cttggtggtgtttgtctgaacgttggttgtattccatctaaagcactgcttcacgttgca
aaagtaattgaagaagctaaagcccttgctgatcacggtatcgtgttcggtgaaccgcaa
acagatattgataaaatccgtctttggaaagagaaggttatcgatcagctaactggcggt
cttggtggtatggctaagatgcgtaacgtaacagtggttaatggtttcggtaagtttacc
ggccctaactctatcgatgttgaaggtgatgatggtgttactactgttaacttcgacaac
gctattgttgctgcaggttctcgcccgattaaacttcctttcattccgcacgaagatcca
cgtatctgggactcaacagatgctctggagctgaaagaagttcctggaaaactgcttatc
atgggtggtggtatcatcggccttgaaatgggtacggtttaccactctctgggttctcag
attgacgttgttgagatgttcgatcaggttatcccggcagcagataaagatgtagttaag
gtttacaccaagcgcattaaagataagtttaacctgatgctggaaacaaaagtgacagca
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagaaagcaccagcagaa
gctgagcgctatgatgcggtacttgtggcaattggccgtgtgccaaacggtaagctgatt
gacgcagagaaagctggtctggaagtggatgagcgtggctttatcaatgtagataagcag
atgcgtactaacattccacacatccacgctatcggtgatattgttggtcagccaatgttg
gctcacaaaggtgtgcatgaaggtcacgtagctgctgaagttatcgcgggtaagaagcac
tacttcgatcctaaagtgattccttcaatcgcttatactgagccagaagttgcatgggtt
ggtaaaactgaaaaagaagcaaaagaagaaggtatcaactatgaagttgcgactttccct
tgggctgcatctggtcgtgcaatcgcatctgactgtgctgatggtctgactaagcttatc
ttcgataaagatactcaccgtattgttggtggtgctatcgttggtacaaacggtggtgaa
ctgcttggtgaaatcggtctagcgatcgaaatgggttgtgatgctgaagatttggcactt
actatccacgctcacccgactctgcacgaatcggtaggtttggctgctgaagtatttgaa
ggtacgatcactgaccttccaaataagaaggctaagaagaagtaa

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