Vibrio iocasae: SNR28_23440
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Entry
SNR28_23440 CDS
T11169
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vic Vibrio iocasae
Pathway
vic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SNR28_23440 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_23440 (ung)
Enzymes [BR:
vic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SNR28_23440 (ung)
DNA repair and recombination proteins [BR:
vic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SNR28_23440 (ung)
Prokaryotic type
SNR28_23440 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XHF84390
LinkDB
All DBs
Position
2:complement(2994141..2994818)
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AA seq
225 aa
AA seq
DB search
MSQALTWHDVIGREKEQEYFRQTMAFVQAERDSGKTVYPPAQDVFNAFRYTELSDVKVVI
LGQDPYHGPNQAHGLCFSVLPGVKTPPSLVNMYKELAQDIPGFEIPGHGYLKSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAVNEHCEGVIFLLWGAHAQKKGRVIDRNRH
HVLMAPHPSPLSAHRGFFGSKHFSQTNEILSQKGFKVIDWQPKLD
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacttacatggcacgatgtcatcggtcgtgaaaaagaacaagagtacttc
cgtcagactatggcctttgtgcaggccgagcgcgattcaggcaagactgtttaccctcca
gcgcaggatgtattcaatgcgtttcgttacacagagctttccgatgtcaaagtggtcatt
ttaggacaagacccttaccacggacctaaccaagctcatggtctctgtttttctgtactt
cctggtgttaaaacacctccgtctctagtaaacatgtacaaagagctggcgcaggatatt
cccggttttgagattccaggacacggctacctgaaaagttgggcggagcagggtgtattg
cttttgaacacggttttaactgtcgagcagggtaaagcccattctcattcaaaaacaggt
tgggaaacctttacagacagagtaatcgaagcagtcaacgagcactgtgaaggggttatt
tttctgctgtggggagcgcatgctcagaagaaagggcgggtaattgaccgtaaccgtcac
catgtattgatggcaccgcacccttctccactgtcagcccatcgtggtttttttggtagt
aaacacttctcccaaaccaatgagattttgtcccaaaaaggctttaaagttatcgattgg
caaccaaagctagattag
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