Vibrio iocasae: SNR28_23665
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Entry
SNR28_23665 CDS
T11169
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vic Vibrio iocasae
Pathway
vic02024
Quorum sensing
vic03060
Protein export
vic03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SNR28_23665 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SNR28_23665 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNR28_23665 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vic02044
]
SNR28_23665 (ffh)
Enzymes [BR:
vic01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SNR28_23665 (ffh)
Secretion system [BR:
vic02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SNR28_23665 (ffh)
Eukaryotic Sec-SRP protein
SNR28_23665 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
KTI12
T2SSE
AAA_31
AAA_33
AAA_30
Mg_chelatase
APS_kinase
AAA_19
AAA_24
ATP_bind_1
AAA_26
AAA_14
KAP_NTPase
AAA_16
AAA_18
YqeC
Motif
Other DBs
NCBI-ProteinID:
XHF84430
LinkDB
All DBs
Position
2:complement(3045577..3046977)
Genome browser
AA seq
466 aa
AA seq
DB search
MFENLTDRLSSTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFIKRVKESAV
GIEVSKSLTPGQEFIKIVQSELEGVMGESNEALDLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASDIGVDFFPSSADQKPIDIANAAIDHAK
KKFFDVLIVDTAGRLAIDEQMMGEIQELHSAITPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLERNVDKKKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMMDKLPGMNNL
PADVKDKVDDKMFKQMEAIISSMTMKERQRPEIIKGSRKKRIAAGSGVQIQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGMGGMGGPGGFGRFGR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaacggatagactatccagtacgctgaaaaatatcagcggtaaaggt
cgccttacagaagacaatattaaagagacgctacgtgaagtgcgtatggcacttcttgaa
gcggacgtcgctcttcctgttgtacgtgactttatcaaaagagttaaagaaagcgcggta
ggtatcgaggtttctaaatctctgactccggggcaggagttcatcaagatcgttcagtca
gagctggaaggtgtgatgggcgaatccaacgaagcgttggatctggcagctcagccacct
gcggttattttgatggccggtctgcaaggtgccggtaaaacgaccagtgtcggtaagctt
tctaaactccttaaagagcgtgacaagaagaaagtacttgtcgtgtctgccgacgtttac
cgccctgcggcgatcaaacagctggaaacactggcatcggatatcggtgttgatttcttc
ccttcttcagcagatcaaaaacctattgatatcgcaaacgctgcaattgaccacgcgaag
aagaaattctttgacgttctgattgtcgataccgcgggtcgtcttgctattgatgagcag
atgatgggtgagattcaggagcttcactcagcgatcactcctgtagaaaccttgtttgtt
gtggacgcaatgacgggtcaggatgcggcaaatacagcgaaagcatttggcgatgcacta
ccactaacaggtgttatcctgactaaagtggacggtgatgcgcgtggtggtgcggcactt
tctgttcgtcacattactggcaagcctatcaagttccttggtgttggtgaaaagactgac
gcgcttgaacctttccatccggatcgtgttgcttctcgtattcttggcatgggtgacgtt
ctttctcttatcgaagatctagagcgtaatgtcgataagaagaaagctgaaaagctggcg
aagaagttcaaagaaaagaaaggttttgaccttgaagacttccgagagcaattaggtcag
atgcagaacatgggtggtatgatgggcatgatggataagcttccaggcatgaacaaccta
ccggctgatgtaaaagataaagttgacgacaagatgtttaagcagatggaagcaatcatc
agctcaatgacaatgaaagagcgtcaacgccctgaaatcatcaaaggctctcgcaagaag
cgtattgctgctggttctggtgtacagattcaagatgtaaaccgcctgcttaagcagttc
actcaaatgcagaagatgatgaagaagatgcagaagggtggtatgaaaggcatgatgcgt
aacatgcaaggcatgatgggcggaatgggaggcatgggcggtatgggtggcccaggcgga
ttcggtcgtttcggacgttaa
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