Vibrio iocasae: SNR28_23865
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Entry
SNR28_23865 CDS
T11169
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vic Vibrio iocasae
Pathway
vic00470
D-Amino acid metabolism
vic00550
Peptidoglycan biosynthesis
vic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SNR28_23865 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SNR28_23865 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vic01011
]
SNR28_23865 (murD)
Enzymes [BR:
vic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SNR28_23865 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vic01011
]
Precursor biosynthesis
Amino acid ligase
SNR28_23865 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
XHF84462
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Position
2:complement(3088843..3090162)
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AA seq
439 aa
AA seq
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MDRWNNINKVVVLGLGITGLSVVNYLLKMPKSLSIKVIDTRENPPGKEELNSSVELHTGS
WNMEWLLEADMIVANPGIALATPELKQVAEKNIPIVGDIELFAWAAEAPIIAITGSNGKS
TVTDLTGVMAKAAGLKVGVGGNIGVPALELLNDPCELYVLELSSFQLETTSSLQLKAAAF
LNLSEDHMDRYEGKLSLYKKAKQRIFANADYAVVNRDDPETFPEQFDGEVVTFGFDEKEF
GLSQGNGCEYLSDHGTQVLATSELSLVGKHNIANVLTVLALLKCAGIDYTQAFDALKRYK
GLTHRCQLVVERNGVRWVNDSKATNVASTLAALSGLDCSGTLHLLVGGVGKGADFSELAP
VLAKLSVKLYCYGEDGDEFLKLHPSATRWVSIEEIVGSVSQEVQSGDMVMLSPACASFDQ
FKNFMARGDAFAQLAEQYS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatagatggaacaatataaataaggttgttgtactagggctcggtattaccgggctc
tctgtcgttaactacctgctaaaaatgcccaaatcactttcgattaaagtgattgataca
agagaaaatcctcctggtaaagaagaactgaacagcagtgttgagcttcataccggaagc
tggaatatggaatggctgctagaagccgatatgattgtggcgaacccaggcattgcgctg
gcaacacctgaactcaagcaagttgccgaaaagaacattccgattgtcggggatattgaa
ctttttgcctgggcagctgaggccccgatcatcgccattaccggttcgaacggaaaaagc
acggttacagatttaacgggtgtcatggcaaaagcggcaggattaaaagtcggagttgga
ggaaacattggtgttccagccctggagcttttaaatgatccttgtgaactgtatgtcctg
gagctctcgagttttcagctggaaactacctcgtctctgcaactcaaagctgcggctttt
ctaaacctttctgaagatcatatggatcgttatgaagggaagttatctctatataaaaaa
gccaagcaacgtatctttgctaatgccgattatgcggtggtgaacagagatgacccagag
actttcccggaacagtttgatggtgaagtcgtcacatttgggtttgatgagaaagagttc
ggcttatcgcagggtaatggttgtgaataccttagcgatcacggaactcaggttttggcg
acatctgaactgagtctggttggaaagcataatattgccaatgtattgactgtactggca
ctgctaaaatgcgcaggtatagattacacacaagcatttgatgcattaaaaagatacaaa
gggctaacacaccgttgtcagctcgtagtagagaggaatggcgttcgctgggtcaatgat
tcaaaagcgacgaatgtagcgagcaccttggctgcgctttcaggtttagattgctcagga
acattgcatttattagtgggtggtgttggcaaaggagccgatttttctgaacttgcacca
gtattggcgaagttaagtgtgaagctttattgttatggtgaagacggagacgagttcttg
aaacttcacccatcggctactcgctgggtctctattgaagagatcgtgggctctgtttct
caggaagtgcaatcaggtgacatggttatgctatctcctgcttgtgctagttttgatcag
tttaaaaactttatggccagaggggatgcttttgctcaactggcagagcagtattcgtag
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