Vibrio iocasae: SNR28_25150
Help
Entry
SNR28_25150 CDS
T11169
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
vic Vibrio iocasae
Pathway
vic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SNR28_25150 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vic01007
]
SNR28_25150 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vic03016
]
SNR28_25150 (trpS)
Enzymes [BR:
vic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SNR28_25150 (trpS)
Amino acid related enzymes [BR:
vic01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SNR28_25150 (trpS)
Transfer RNA biogenesis [BR:
vic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SNR28_25150 (trpS)
Prokaryotic type
SNR28_25150 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
NADH_oxidored
Motif
Other DBs
NCBI-ProteinID:
XHF84691
LinkDB
All DBs
Position
2:complement(3346762..3347766)
Genome browser
AA seq
334 aa
AA seq
DB search
MSKPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCIVDLHAITVRQDSKALYEAT
LDALAICLAVGVTPEKSTLFVQSHVPEHAQLGWVLNCYTQMGELNRMTQFKDKSQRYAND
INVGLYDYPVLMAADILAYQAQQVPVGSDQKQHLELARDIANRFNNLYGETFAVPEPYIP
SVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSITKKIKSAVTDPEDPPRVIYDVENK
PGIANLMGLMHAATGQSFEEIEKDFEGKMYGHFKVAVAESVVAMLEPVQAEYKRIREDRA
YLDSVMKTGAEKASARAAVTLKKVYEAVGFVARP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacctatcgtattaagtggcgttcagccatcaggtgaactaagtattggtaac
tacttaggtgctctgcgtcagtggcaacagatgcaggacgattatgattgccaatactgt
atcgtagaccttcatgcgattacggttcgtcaggattctaaggcgctatatgaagcaaca
ctggatgctttggctatctgtttggctgttggtgtaactccagagaagagtactctattc
gttcaatcccacgtacctgagcacgctcaactgggttgggttctgaactgctatacgcag
atgggtgaactgaatcgtatgactcagtttaaagacaagtctcagcgttatgcgaacgac
attaacgttggcctttacgactacccggtactaatggctgcggacattctggcttatcag
gcacagcaagttcctgttggtagcgaccagaagcagcatcttgagcttgctcgtgatatc
gcgaaccgctttaacaatctatatggcgaaacatttgcagttcctgaaccatatattcca
tctgttaacgctcgtgtaatgagtcttcaggatgcgactaagaagatgtctaagtcggat
gataaccgtaaaaatgttatcactctgctagaagaccctaagtctattaccaagaagatt
aagagtgcggtaaccgatccagaagatccgccacgtgttatctacgatgtagagaacaag
cctggtatagcaaaccttatggggctaatgcatgcggcaacaggtcaaagcttcgaagag
attgagaaagatttcgaaggtaagatgtacggccactttaaagtcgctgtcgctgaatct
gtagttgctatgcttgagcctgtacaggcggaatacaagcgaattcgtgaagatcgtgcg
tatcttgattcagtgatgaagacgggtgcagagaaagcatcagctcgcgcagcagtaact
ttgaagaaagtatacgaagctgttggttttgtagcacgcccataa
DBGET
integrated database retrieval system
