Vibrio iocasae: SNR28_26390
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Entry
SNR28_26390 CDS
T11169
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vic Vibrio iocasae
Pathway
vic00730
Thiamine metabolism
vic01100
Metabolic pathways
vic01240
Biosynthesis of cofactors
Module
vic_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SNR28_26390 (thiC)
Enzymes [BR:
vic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SNR28_26390 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
XHF84906
LinkDB
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Position
2:complement(3597682..3599592)
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AA seq
636 aa
AA seq
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MSSRKQSRLIARNFIDTLSVQSYPNSTKIYVEGSKSSIRVPMRQISLDESLVGGTKEAPV
FEPNEPVHVYDTSGMYTDPTHKVDLHKGLPKLREGWILERSDTEVLNAVSSVYTQERLDD
ESLTELRYGNLPSIRKARLGKNVTQLHYARQGIITPEMEFIAIRENMRRAEYRDKALIAQ
HQGRSFGANLPKEITAEFVRSEVAEGRAIIPSNINHPETEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GIAENLTWEVMRDTLIEQAEQGVDYFTIHAGLRLHHIPMTAKRVTGIVSRGGAIISKWCL
AHHQESFLYTRFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTSIAW
EYDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPDKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNAMSKAR
FEFRWEDQFNLALDPETARAYHDQTIPQQSGKVAHFCSMCGPKFCSMKLSHEIRASEGRS
ANAPNNDSVDFQLEQKSKQFLENGSSLYSLEFEEDS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcaaacaatcaaggcttatagccagaaactttatcgatacgctatcggtt
cagtcataccccaactcaaccaaaatctatgtagaaggcagcaagagtagtattcgagtg
cctatgaggcagataagcctggatgaaagtttggttgggggaactaaagaagcgccagta
tttgagccgaatgaacctgttcatgtgtacgatacatcgggtatgtatacagatcctacc
cataaagtagaccttcataaaggtttaccaaaattaagagaaggttggattttagagcga
agtgataccgaagtactaaacgcagtaagttctgtttacacccaggagcgcttagacgat
gagtcattaacagagcttcgttatggcaatttaccttcaattagaaaggcaagacttggt
aaaaatgtaacgcagcttcactatgcccggcaaggaatcataacacctgaaatggagttt
atagccataagggaaaacatgagacgtgctgaataccgtgataaagctctgatagctcag
catcagggtagaagttttggtgcaaacttacctaaagaaataacagctgaatttgtacga
agtgaagttgctgaagggcgagcaattataccttctaacatcaatcaccccgagaccgaa
ccaatgataatcgggcggaactttctggtaaaggtgaacgctaatattggtaactcttca
gtgacatcctctatagaagaagaggttgagaagctggtttgggctactcgttggggtgca
gacacggtaatggatctatcgacaggtagaaacattcatgaaactcgggagtggattctt
aggaatagcccagttccaataggtacagttcctatgtatcaggcattagaaaaggttaac
ggcattgctgaaaacctgacatgggaagtcatgcgagacacactaatagagcaagcagag
cagggggtggattacttcaccattcatgccggtctcaggcttcaccatattccaatgacc
gcaaaacgtgttaccggaattgtttcccgaggtggtgccataatatcaaaatggtgtctg
gcgcatcatcaagagagctttttgtatacgcgatttagagagatatgcgagatttgtgct
cagtatgatgtagctctttcacttggagatgggctacgcccgggttctattgcagatgca
aacgacgaagctcagtttgctgaacttcgtactctcggagagctgacatctattgcatgg
gaatatgatgtccaggtaataattgaagggcctggacatgttccgatgcatatgatcaaa
gagaatatggaagagcaactagaacattgtcatgaggctccattttatacccttgggcct
ctaacgacagatattgctccaggatatgaccatattacatcaggtataggtgccgcgatg
atcggctggtacggctgtgcgatgctctgttacgtaacgccaaaggaacatcttggttta
ccggataaagaagacgtaaagacaggattaatcacgtataagctagcagcacatgcagca
gacctagcaaaggggcaccccggagctcaaattcgtgataatgctatgtccaaagcaagg
ttcgagtttagatgggaagaccagttcaatctagcccttgatccggagacagctagagct
tatcacgatcaaaccattccgcaacagtcaggaaaagtcgctcacttctgctctatgtgt
ggacctaagttttgctcgatgaagctctcgcatgaaatacgtgcgtcagaaggtcgatca
gctaacgcccctaataacgatagtgttgatttccagttagaacagaagtcaaaacagttt
ttagaaaatggaagttccctgtatagccttgagtttgaggaggatagttaa
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