Vibrio sp. dhg: DBX26_00215
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Entry
DBX26_00215 CDS
T11094
Name
(GenBank) GGDEF domain-containing protein
Organism
vid Vibrio sp. dhg
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
PAS_13
Motif
Other DBs
NCBI-ProteinID:
AXT69544
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Position
1:complement(45042..47495)
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AA seq
817 aa
AA seq
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MFRFDIPSSLLADWQDALQQCCNANHAQGQVYAFNDNEQWQHSALSTAEQNHDAIVAEIE
QITAQYTPFQLETVNIAYEQQILSICPVWLPNGDLFATITLTYTNAQSHHVPAWLSALAG
RFSFDVSQHYQQEQQRHLRYQQDQSQIPTLQEFIDCLEDHIWIKGTDGLYAMTNRSVEQA
WQKTNQEIIGKNDFDLFSEQRAEKFIQADITVVETGNQNIVEECRQIDSNNNPTWLETIK
SPVRNQAGELIGVMGMTRNITRRKTIETQLTLASKIFNNSQEGMIITDRDANIIDINPAF
TNITGYSAEEVIGHTPKILHSGHHDSSFYLNLWSELQVKGQWKGEFINRKKDGSFYPQLA
TISAVMDDKDQLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLGLLEQHIET
GQKSQQGFATLFLDIDHFKHINDSMGHFCGDQLLTKLAIRLQDTLHLNAHVARISGDEFV
IILPEAQSDVALSETVDSILGVFHQPFKLTSHESLRVSASIGIALYPTDGQDSETLLKNA
DTAMYLAKKNGRNGYAFYSPDLTHKSISHVRIQSALHEAIEKQQLRLEYQPQYNLEQNSI
VGVEALLRWQHPEFGLVSPADFIPIAEKTGLIQSIGDWVLRQACIQGHAWLESGINFGKI
AVNVSALQLQQSNFIDRLQVILQETGFSAHHLDIEITESFLLIDPQQAIASLNQLRELGI
EISLDDFGTGYSSLSYLKGLPINKLKIDRSFVKDVPSHSDSNAIVNAIIAMGKTLSLKVV
AEGIETQEQAQYLSDKGCIYGQGFLFSPSVTPNKLFL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgctttgatattccatcttctttattagcagactggcaagatgccctgcaacag
tgctgtaatgccaaccatgcacagggacaagtctatgccttcaatgacaacgaacagtgg
caacacagtgcgttgtcgaccgcagagcagaaccatgatgcgattgttgccgagattgag
cagatcaccgctcaatataccccttttcaattagaaaccgtcaatatagcttatgagcag
cagatcctcagcatctgtccggtgtggctacctaacggtgatttgtttgccacgattacg
ctgacttacacaaacgcacaaagccatcacgtgccagcgtggctgagcgcccttgctggt
cggtttagttttgatgtgagccaacattaccaacaagaacaacaacgtcatctgcggtat
cagcaagatcaaagtcaaatcccaacattacaagagtttatcgactgccttgaagaccat
atctggatcaaaggcaccgatggcctgtatgcaatgactaaccgaagcgtcgagcaagcc
tggcaaaaaaccaatcaggaaatcattggtaaaaatgattttgaccttttcagcgaacag
cgcgctgaaaaattcattcaagctgatattacagtggttgaaactggcaatcagaatatt
gttgaagagtgccgacaaatcgactcgaacaataatccaacctggctcgaaaccattaag
tcacctgtacgcaatcaagcaggtgagctgattggtgttatgggcatgacgcgaaacatc
acacgtagaaaaaccatagaaacacagctaacgttggcgtcgaagatcttcaataactcg
caagaagggatgatcatcaccgatcgtgatgcaaacattatcgatatcaatcctgccttt
acgaacatcacaggatacagtgcagaagaagtgattggtcatacgccgaaaatccttcac
tctggacaccacgatagcagcttctatctaaatttatggtctgagctacaagttaaagga
cagtggaaaggcgagttcatcaaccgcaagaaagatggcagcttttaccctcaactggcc
accataagcgctgtaatggacgacaaagatcagttgatcaactatatctgtgtgtttgaa
gacatttcggtgcgcaaagcacatgaagaaaagctgcagcgaatggcgttttatgacccg
ttgaccaatctgccaaatcgtactcatttacttggattgctcgagcagcacatcgaaact
ggtcaaaagagccagcaaggctttgcaacccttttcctggatatcgatcactttaagcac
atcaacgacagtatggggcatttttgcggtgaccaattgctgaccaaactggcaatacgt
ctgcaagacaccttgcatctcaatgcccatgtcgcacgaatcagcggcgacgaatttgtg
attattcttccagaggcgcaaagtgatgtcgcgctgtccgaaacggtggacagcatctta
ggtgtattccatcaaccgtttaagctgaccagtcacgaatcattgcgtgtctcagcaagt
atcggtattgccctgtatccaaccgatggtcaagacagtgaaacactgctgaaaaatgca
gatactgccatgtacttagcgaaaaagaatggccgtaacggctacgctttttattcaccg
gatctgactcacaagtccatttcccacgtgcgaattcaatcagcgctgcacgaggcaata
gagaaacagcaactgcgtttggagtatcaaccccaatacaacctggagcagaactctatt
gttggcgtggaggccctgttgcgctggcagcaccctgaatttggcttagtgtcccctgct
gattttattccaattgcagaaaaaaccgggctaattcaaagcatcggcgattgggttctc
cggcaggcttgtattcaaggccacgcttggctggagtctggaattaacttcggcaaaata
gccgtcaatgtatccgcactccaactgcagcaatcgaactttatcgaccggcttcaggtg
atacttcaagagactggtttttctgcgcatcatttggatatcgaaatcaccgaaagcttt
ttgttgatcgacccacaacaggccattgcgtcgttaaatcaactgcgagaactcggtatt
gaaatatctttggatgattttggtacaggctattcctcgctttcttatctgaaaggtctg
ccgatcaacaaattgaagatcgaccgttcatttgtgaaagatgtaccgagtcacagcgac
agcaatgccatcgttaatgcgatcatcgctatgggcaaaaccttatcgcttaaagtcgtc
gcagaagggattgaaactcaagaacaagcacaatacctgtcagacaaaggatgtatttac
ggtcagggatttttatttagcccatccgttactcccaacaagctatttctatag
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