KEGG   Vibrio sp. dhg: DBX26_00700
Entry
DBX26_00700       CDS       T11094                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vid  Vibrio sp. dhg
Pathway
vid03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DBX26_00700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vid03400]
    DBX26_00700
Enzymes [BR:vid01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     DBX26_00700
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DBX26_00700
DNA repair and recombination proteins [BR:vid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DBX26_00700
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn_ribbon_6 Zn_ribbon_IS1595 Auto_anti-p27
Other DBs
NCBI-ProteinID: AXT69634
LinkDB
Position
1:148432..149241
AA seq 269 aa
MPELPEVEVSRMGITPHMLDQTIQAFVFRTPKLRWDIPQELKQLEGQVIRAIRRRAKYLL
IETDKGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLTNGKVLRYNDPRRFGAWLWCAPG
ESHTVLDHMGPEPLTDEFNAEYVAEKAQGKRVAVKQFIMDNKVVVGVGNIYANESLFKSR
IHPTRPAGKVTSQEWALLVTNIKTTLEIAINQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGEPLKEQKIGQRNTFFCEECQK
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaattacctgaagtcgaagtcagccgtatgggaatcacgccgcatatgcttgat
caaacgatccaggcgtttgtgtttcgtacccccaaactacgctgggatatcccccaggaa
ctgaaacagcttgaagggcaagtgattcgtgcaatccggcgccgtgccaagtacctgttg
attgagactgataagggaaccgcgattgttcatctgggtatgtcaggctcgctacgtgtg
cttgatgccgattttccaccggctaaacatgatcatgtggatctgaagctgactaatggc
aaagtactgcgctacaacgacccgcgtcgatttggagcgtggttatggtgcgcgccgggt
gagtctcacaccgtgcttgatcatatgggacctgagccgttaactgacgaattcaatgct
gaatatgtggcagaaaaagcgcaaggcaagcgtgttgctgtaaagcagttcattatggac
aacaaagttgttgtcggcgttggtaatatctacgcgaatgaatcactgtttaaatctcgg
atccatccaaccagacctgctggcaaagtcacatcgcaagaatgggcgttactggttacc
aacatcaaaaccacgctagaaatcgcaataaatcaaggtggtaccacgctcaaggatttt
gcacaagcagatggcaagcctggatattttgcccaggaactgttggtttatggtaaagcg
ggtgaaccttgccccgaatgcggagagccgcttaaagagcagaagattggtcagcgtaat
acgttcttttgtgaggaatgccagaagtaa

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