Vibrio sp. dhg: DBX26_02130
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Entry
DBX26_02130 CDS
T11094
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vid Vibrio sp. dhg
Pathway
vid00470
D-Amino acid metabolism
vid00550
Peptidoglycan biosynthesis
vid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DBX26_02130
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DBX26_02130
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
DBX26_02130
Enzymes [BR:
vid01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DBX26_02130
Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
Precursor biosynthesis
Amino acid ligase
DBX26_02130
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Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_9
TrkA_N
DAO
Motif
Other DBs
NCBI-ProteinID:
AXT69899
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Position
1:447435..448748
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AA seq
437 aa
AA seq
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MERWQNIHSVIVVGLGITGLSVVKHLRKYQPQLVVKVIDTRANPPGAERLPEGVELHSGG
WNTVWLAEADLVVTNPGIALATPEIQSVLGLGTPVVGDIELFAWAVTKPVVAITGSNGKS
TVTDLTGVMAKAAGLSVGVGGNIGVPALDLLDQEADLYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYESMADYRSAKLRIFNHAELAVVNRDDQETFPDHDMPVVTFGGDEQAFGL
ETDGEKTWLLDHGQRVIASDELKLVGKHNLANVLVVLALLKTAGVDCHNTLNTLKNYTGL
THRCQVVEDNQGVKWVNDSKATNIASTMAALSGLELTGKLYLLVGGVGKGADFTPLEPIF
ATLKLQLCCFGKDGDEFLPLHPSATRFDTMEDVIQQISSQLKAGDMVMLSPACASFDQFD
NFMARGDAFAALAKKYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttggcaaaacatacatagtgttatcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctaagaaaatatcagccacagctggtggttaaagtcattgatact
cgagctaatcctccgggggctgaacgccttcctgaaggggttgaactgcacagcggtggc
tggaataccgtgtggcttgcagaggctgacttggtggtgacgaaccctggtatcgcgctt
gcgacgcctgaaattcagtctgtactaggcctgggaacccctgttgtcggagatattgaa
ctgtttgcttgggcagtcactaagcccgtcgttgcaattaccggctcaaacggaaaaagc
acggtaacagatttgactggcgtaatggcaaaagctgctgggttaagcgttggtgttggc
ggcaatattggtgttcctgcactcgatctacttgatcaagaggcagacttgtatgtgctt
gaactttctagcttccagctggaaaccacgtctagcctcaagttaaaagcggcagcgttt
ctgaatctttctgaagatcatatggatcgctatgaaagcatggccgactaccgatcagca
aaattgcgtatttttaatcatgctgagcttgcggtagtgaatcgagatgatcaggagacc
ttccctgatcatgacatgccagtggttacctttggtggtgatgagcaagcatttggttta
gaaaccgatggtgagaaaacctggttacttgatcacggccagcgcgtgattgccagtgat
gaactcaagcttgtcggtaagcacaatttagcgaacgtactggttgtattggcactgctt
aagactgcgggtgttgattgtcacaacacattgaatacactaaaaaattacaccggactg
acacaccgttgccaggttgttgaagataatcaaggtgttaaatgggtcaatgattccaag
gcaaccaatattgcgagcacgatggcggcactatcggggttggagctgactggcaagttg
tatctactggttggtggcgttggtaaaggtgcagatttcactccattagaaccgattttc
gcgacgctcaaattacagttgtgctgctttggtaaagatggtgatgagtttttaccattg
catccatctgcgactcgtttcgatacgatggaagatgtgattcagcaaatatcttcacag
ttaaaagcgggtgatatggtgatgctgtctcctgcatgtgctagctttgatcaattcgac
aactttatggcacgaggtgatgcattcgccgcgcttgctaaaaaatacgcataa
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