Vibrio sp. dhg: DBX26_02195
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Entry
DBX26_02195 CDS
T11094
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vid Vibrio sp. dhg
Pathway
vid00220
Arginine biosynthesis
vid00240
Pyrimidine metabolism
vid00250
Alanine, aspartate and glutamate metabolism
vid01100
Metabolic pathways
vid01110
Biosynthesis of secondary metabolites
vid01240
Biosynthesis of cofactors
Module
vid_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DBX26_02195 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DBX26_02195 (carB)
00220 Arginine biosynthesis
DBX26_02195 (carB)
Enzymes [BR:
vid01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DBX26_02195 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Epimerase
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AXT69911
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Position
1:463759..466992
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AA seq
1077 aa
AA seq
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MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFDEMVDLEAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEEEVKAGG
YAGLTKDVLRQLKRKGFSDARLSKLLGVAESEIRRAREQFDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTTMEQAVEKSKEIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNTQFAVKGNDVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKERVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMSHTADAKASVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtattctaattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagcccttcgtgaagaa
ggctaccgagttattctggttaactcgaaccctgcgacaatcatgactgacccagagatg
gcagatgcgacttacatcgagccaatccaatgggaagtggtacgcaagatcatcgaaaaa
gagcgtccagatgcggttctaccgacaatgggtggtcagactgcgcttaactgtgctcta
gacctagagaagcacggcgttcttgaagagttcggcgtagaaatgattggtgcaaccgct
gacgcgattgataaagcggaagaccgttctcgtttcgataaagcaatgaagtctatcggc
cttgagtgtcctcgcgcagatactgcgaagagcatggaagaagcttacaaagttttagac
atggttggcttcccttgtatcatccgtccatcatttacgatgggtggtactggtggcggt
atcgcttacaacaaagaagaattcgaagaaatctgtcgtcgtggtctggatctttctccg
actaacgaactgcttatcgatgaatctctaatcggttggaaagagtacgaaatggaagta
gttcgcgacaaagcggacaactgtatcatcgtatgttcaatcgaaaacttcgacccaatg
ggcatccacacgggtgactcaatcactgtagctccagcacaaacactgactgacaaagaa
taccagctaatgcgtaacgcatcgctagcagttctgcgtgaaatcggtgtggaaacaggt
ggttcaaacgtacagtttggtatcaacccgaaagatggccgtatggttatcatcgagatg
aacccacgtgtatctcgttcttctgctctagcgtcgaaagcaacgggtttcccaatcgct
aagattgcagcgaaactggctgttggctttactctggacgagctacaaaacgacatcact
ggtggtgcaactccagcatcattcgaaccaactatcgactacgtagtaactaagattcct
cgctttaacttcgagaaatttgcaggtgctaacgaccgtctgacaacacagatgaagtca
gttggtgaggtgatggcgattggtcgtaaccaacaagaatctcttcacaaagctctacgt
ggcctagaagttggcgcgactggctttgatgagatggttgatctagaagcgccagacgca
ctgactaagattcgtcacgagctgaaagaagctggtgctgagcgtatctggtacattgct
gacgcattccgtgcgggcatgtctgttgatggtgttttcaatctgactaacatcgaccgc
tggttcctggttcaaattgaagaactagtgaaactagaagaagaagtgaaagcaggcggt
tacgctggcttgaccaaagacgttcttcgtcaacttaagcgcaaaggcttctctgatgct
cgcctgtctaaattacttggtgttgctgaaagcgaaattcgtcgcgctcgtgaacagttc
gacattcacccggtttacaaacgtgtggacacgtgtgcagcagaattctcttctgacacg
gcttacatgtactcatcttacgatgaagagtgtgaagcaaacccaacagacaaagacaag
atcatggttcttggcggcggtccaaaccgtatcggccaaggtatagaattcgattactgt
tgtgtacacgcatcgctagcactgcgcgaagacggttacgaaaccattatggttaactgt
aacccagaaacggtatctactgactacgatacgtctgaccgtttgtacttcgaaccagta
acgctggaagacgtattgtctatcgctcgcgttgaaaagccaaaaggtgtgattgttcag
tacggtggtcaaacgccacttaaactggctcgcgcactagaagctgcaggcgtgccaatc
attggtactagcccagatgcaatcgaccgcgcagaagaccgtgagcgtttccaagctgct
gttgagcgtctaggccttcttcaaccacaaaacgctaccgttacaacgatggagcaagcg
gttgagaagtctaaagaaatcggcttcccattggttgttcgtccatcttacgtactaggt
ggccgtgcgatggaaatcgtatacgacgagcaagacttacgtcgctacttcaacgaagct
gtaagcgtatcgaacgagtctccagttctactagaccgtttccttgatgatgcaactgaa
gttgatatcgacgctatctgtgatggtgagcgtgttgttatcggcggtatcatggagcac
atcgagcaagcaggtgttcactcaggtgactcagcatgttcacttccagcttacacgcta
agccaggaaatccaggataagatgcgtgagcaagttgagaagttagcatttgaactaggt
gtacgcggtctgatgaacactcagtttgcagtgaaaggcaacgacgtttacctaatcgaa
gttaaccctcgtgctgcgcgtacggtaccattcgtttcgaaagctacaggcgcaccacta
gcgaaaatcgctgcacgtgtaatggcgggtcaatctctagagtcgcaaggctttactaaa
gagattattcctccttactactcagtgaaagaagtggttctaccgttcaacaaattccct
ggtgttgacccactattgggcccagaaatgcgctcaacaggtgaagtaatgggtgttggt
gcaacgtttgcagaagcttatgcaaaagcagaactaggctgtggcagcgtttaccctgaa
ggtggccgtgcgctactatcagtacgtgaaggcgataaagagcgtgtggttgacctggct
tctaagctagtgaaactaggctaccagttggatgcgacacacggtacagctgtaattcta
ggtgaagcgggtatcaaccctcgtctagtaaacaaagtacacgaaggtcgtcctcacatt
cttgaccgtattaagaacaacgaatacacctacatcgtgaacacggcggcaggtcgtcaa
gcgattgaagattcgaaagttctacgccgtggcgcattggcagagaaagtgaactacaca
acaacgctaaacgcagcgttcgctacgtgtatgtctcacacagctgatgcaaaagcgtct
gtgacttctgttcaagagctacacgctaaagtgaaagcgagtctagaagcgtaa
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