KEGG   Vibrio sp. dhg: DBX26_03410
Entry
DBX26_03410       CDS       T11094                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vid  Vibrio sp. dhg
Pathway
vid00260  Glycine, serine and threonine metabolism
vid00460  Cyanoamino acid metabolism
vid00630  Glyoxylate and dicarboxylate metabolism
vid00670  One carbon pool by folate
vid00680  Methane metabolism
vid01100  Metabolic pathways
vid01110  Biosynthesis of secondary metabolites
vid01120  Microbial metabolism in diverse environments
vid01200  Carbon metabolism
vid01230  Biosynthesis of amino acids
vid01240  Biosynthesis of cofactors
vid04981  Folate transport and metabolism
Module
vid_M00140  C1-unit interconversion, prokaryotes
vid_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vid00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    DBX26_03410 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    DBX26_03410 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DBX26_03410 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    DBX26_03410 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    DBX26_03410 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    DBX26_03410 (glyA)
Enzymes [BR:vid01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     DBX26_03410 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AXT70138
LinkDB
Position
1:744122..745372
AA seq 416 aa
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACELFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALAIEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGVYPTPVPYAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVENAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTVEDAKELANWMCDVLDSIDNEEVIEATKQKVLDICKRLPVYA
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcggaacaattagcaatcgat
cgtgcatgtgaactattcggttgtgaatacgcaaacgtacagcctcactctggttctcaa
gcaaacagcgcagtatacatggcgcttctgaacccaggcgatacagtattaggcatgagc
ctagcacacggtggtcacctgactcacggttcaccagtaaacttctctggtaagcactac
aacgttatcccttacggtatcgacgaagctggtcaaatcaactacgacgagatggaagcg
cttgcgattgagcacaagcctaagatgatcatcggtggtttctcagcttactctcaaatc
gttgattggaaacgcatgcgtgaaatcgcagacaaagttgatgcttacctattcgtagat
atggctcacgttgctggtcttatcgcagcaggcgtttacccaacaccagtaccatacgca
cacgttgtaacaacaacgacgcacaaaacactagcaggtccacgtggtggtcttatcctg
tctaacgctggcgaagacatgtacaaaaagctgaactcagctgttttccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagctatggaa
cctgaatttaaagcataccaagctcgcgtagttgaaaacgcgaaagcaatggttgctcag
ttccaagagcgcggttacaaaatcgtttctaatggtacagaaaaccacctgttcctagtt
gatctaatcgacaagaacattactggtaaagaagctgacgcagcactaggcgcagcgaac
atcacagtaaacaaaaactcagtaccaaatgacccacgtagcccattcgtaacgtctggt
atccgtgtaggtacgccagcaatcactcgccgtggcttcacagtagaagacgcaaaagag
ctagcgaactggatgtgtgacgttcttgatagcatcgacaacgaagaagttatcgaagcg
acaaaacagaaagtgcttgatatttgtaagcgtctaccagtttacgcataa

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