Vibrio sp. dhg: DBX26_03445
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Entry
DBX26_03445 CDS
T11094
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vid Vibrio sp. dhg
Pathway
vid00550
Peptidoglycan biosynthesis
vid01100
Metabolic pathways
vid01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DBX26_03445 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DBX26_03445 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
DBX26_03445 (mrdA)
Enzymes [BR:
vid01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DBX26_03445 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DBX26_03445 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AXT70145
LinkDB
All DBs
Position
1:complement(751044..752969)
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AA seq
641 aa
AA seq
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MIHRRRSQIRDYQAEARLFASRAIVAFIGIVILMGALVANMYNIQVNQFQDYQTRSNDNR
IKIVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKVKDIDETIKELQTILEITPEQIER
FHRERKRTRRFKSVPLLTQLDEKQVAVFSVNQYRFPGVEISATLKRYYPFSEVLTHVIGY
VSRINDRDIQRLIREEKASNYQATRDIGKLGIEKYYEDILHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAVVIDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRALLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALQEGVVTPQTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDIIKSIEESVDTFFYQVAYDMGIDRISSWMMMFGFGDYT
GIDIYEESKANMPTREWKMSRHRTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNDGA
VTAPHLLKASINNGGDFDEQHSEEYLSYPPIKDVPKKYWDMAKEGMRRVNHGVRGTARRS
FYDMSYETAGKSGTAQVFGLAEDEEYKADEVAEHLRDHALFTGFAPFDDPKVVVTVVLEN
AGGGSSNGAPVARKIFDRVVLGPEKIEPEEDENNVKQEATQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattcatagacgccgcagtcaaattcgagattatcaagccgaagcgcgcctgtttgcc
agccgcgctatcgttgcatttatcggtatcgtcattttgatgggagccctggtcgccaac
atgtacaacattcaggtgaaccagttccaagattaccaaactcgctctaacgacaaccgt
attaaaatcgtaccaattgcgcccaaccgcgggcttatttacgatcgcaacggtgtgtta
ctggcggaaaaccgccctgtctttaacctggagctgactccagaaaaagtgaaagacatt
gatgagaccatcaaagagctgcaaactattctggaaatcacaccagagcaaattgaacgc
tttcatcgtgagcgaaagcgtacccgtcgctttaaatctgttcctcttctcactcagctg
gatgaaaagcaggttgccgtattttcagtcaaccaatatcgctttcccggcgtagaaatc
agtgcgaccctaaaacgttactacccatttagtgaagtgcttacccacgtgattggctat
gtttctcgcatcaacgatcgagacatacaacgcctgattcgtgaagaaaaagcctcgaac
tatcaagcgacccgtgacatcggcaagctcggcattgagaaatattacgaagatatactc
catggtactgctggctatcaagaggtagaggtgaacagtcgtggtcgggtgatccgcaca
ctgaaatatgtcccacccgttcctggcaaagatattgtattgaacctggacattaatctg
cagctttatgtgcaccagttgcttgatggtcgtcgcggcagtgccgtggttatcgaccca
agagataacggtgtgctagcgatggtatctagcccgagctacgatcctaatgccttcgtt
catggtatttctggtaaggcttatcgtgcgctacttaacgataaaaaccgacctctggta
aaccgaacgacattaggtatttatccaccagcgtcaaccatcaaaccatttatggccgtt
gccgcgctgcaagaaggtgttgtgaccccacaaacaacccgtaatgatccaggctactgg
cgtattccaaattccgacactcgccctttccgtgactggctgcgttgggggcatggccgt
gttgatatcatcaaatcaattgaagagtcagtggataccttcttctaccaagtggcttac
gacatgggcatcgatcgcatttccagctggatgatgatgtttggctttggtgattacacc
ggaattgatatttacgaagaaagtaaagccaacatgccgacacgtgagtggaaaatgtct
cgccacagaacaccttggtataaaggcgatacgatcccggtaggtattggtcagggttac
tggactgcaacgccgatgcaaatcgctaaagcgacctcagtgctggtcaacgacggggcc
gttaccgccccacacttgcttaaagcttccatcaacaatggtggcgatttcgacgagcag
cactcagaggaatacctgagttatccgccgattaaagacgtaccgaaaaagtactgggat
atggcgaaagaaggcatgcgccgtgtaaaccatggggttcgaggcacagctcgtcgttcg
ttttacgacatgagctacgaaaccgcaggtaaatccggtaccgcacaggtattcggactg
gcagaagatgaagagtacaaggcagatgaagtcgccgaacatttgcgtgaccacgcctta
tttactggctttgcaccgtttgatgatccaaaagtggtcgtgactgtggttcttgaaaac
gcgggtggcggctcaagtaatggtgcgcctgtagcaagaaaaatctttgaccgtgtcgta
cttggcccggaaaaaatcgagcctgaagaagatgaaaacaacgttaagcaagaggcaacg
caataa
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