Vibrio sp. dhg: DBX26_04880
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Entry
DBX26_04880 CDS
T11094
Name
(GenBank) DUF2219 domain-containing protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vid Vibrio sp. dhg
Pathway
vid00540
Lipopolysaccharide biosynthesis
vid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DBX26_04880
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vid01005
]
DBX26_04880
Lipopolysaccharide biosynthesis proteins [BR:
vid01005
]
Lipid A
DBX26_04880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AXT70395
LinkDB
All DBs
Position
1:complement(1042009..1042995)
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AA seq
328 aa
AA seq
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MHYMKFNKLFILTLLSPVALASNKSTVSFTLDNDGIFGVDHDYTNGIFLSYATGQLRKES
EWSWLSLNNASDRNVDKIELVLGHKMWTPSDIEVDYPLANDRPYAGYLHTEINYLSLTQD
KAVRYNFTIGATGESALSEKAQSLVHSITGSPDPQGWDYQIDDYLALSVGYRAFNKLMRS
EGKNTQWEITNVNDINAGNFRSDVSQGVMFRWGTNLGNSIGAANISVESPFSASMLSNHA
SSWFLFTGFEGRYRFNDITLEGDRSGIPEPSKPYDVTLEHWQTTAVAGATWYNQSYGASI
TFTVKTPEYKESPTDIYGTGSFSVFAFF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcattatatgaaatttaataaattatttattcttactcttttgtcgccagttgctttg
gcatccaacaaatccacagtttcctttacgcttgataatgacggtattttcggtgttgac
catgattacaccaacggcatatttctctcttacgcgaccggacaattaagaaaagaaagt
gaatggagctggctaagcctaaacaacgcctccgacaggaatgtcgataaaatagagctg
gtacttggccataagatgtggacgccgagtgatattgaagtcgactaccctctggcgaat
gatcgcccatacgctggttatctgcacacagaaatcaattacctttcattaactcaagat
aaagctgttcgttataactttaccatcggcgcaacgggcgaaagcgctctgtcagagaaa
gcacaatctctggttcacagcattactggctctccagaccctcaaggttgggattaccaa
attgacgactatctcgcgttaagcgttggataccgcgcgttcaataagttaatgcgcagt
gaagggaaaaacacacaatgggagattaccaacgtcaatgacattaatgccggcaacttc
cgcagtgatgtgtctcagggtgtcatgtttcgttggggaaccaacttaggcaatagcatc
ggtgcagccaacatcagtgtagaaagccccttctcagcaagcatgttgtccaaccacgcc
agcagctggttcttgtttaccgggtttgaaggtcgctaccgtttcaatgacatcacactc
gaaggtgatcgttccggcattccagaaccatctaagccttatgacgtgacactggaacac
tggcaaacaaccgccgttgctggagcaacttggtataatcaaagctatggagcgagcata
acctttacggtgaaaactccagaatataaagagtctccaaccgatatttatggtaccgga
tcgttttctgtcttcgccttcttttaa
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