Vibrio sp. dhg: DBX26_05165
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Entry
DBX26_05165 CDS
T11094
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
vid Vibrio sp. dhg
Pathway
vid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DBX26_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vid03400
]
DBX26_05165
DNA repair and recombination proteins [BR:
vid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBX26_05165
RecFOR pathway proteins
DBX26_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
RecR_HhH
HHH
IMS_HHH
HHH_8
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AXT70448
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All DBs
Position
1:1108454..1109068
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AA seq
204 aa
AA seq
DB search
MIGRLRGTLLEKQPPEVLIEVNGIGYEVQMPMSCFYELPNIGEEAIIYTHFVVREDAQLL
YGFNTVKERALFREVIKANGVGPKLGLGILSGMTASQFVTCVEREDVSTLVKLPGVGKKT
AERLVVEMKDRLKGWGAGDLFTPFTDAAPADSATAASNNAEEEAVSALLALGYKPTQASK
VVSQIAKPDMNSEQLIREALKSMV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacgtcttcgcggcaccttgctagaaaagcaacctcctgaagttttaattgaa
gttaacggcattggttatgaagttcagatgccaatgagctgtttctacgagctgccaaac
atcggcgaagaagccatcatttatactcattttgttgttcgcgaagatgctcagctgctt
tacggtttcaataccgtaaaagagcgtgcgttgttccgtgaagtgattaaagcaaacggc
gtgggccctaaattgggcttgggcattttgtctggtatgacagcaagtcagtttgttaca
tgcgttgaacgagaggatgtttcaacactcgttaagctgccgggcgttggtaagaaaacc
gctgagcgccttgtggttgaaatgaaagaccgtctgaaagggtggggtgctggtgatctc
tttaccccatttaccgatgccgcaccggcagattccgcaacggctgcatctaacaacgca
gaagaagaggcggtgagtgcgctacttgctctgggttacaaaccaacccaagcctcgaaa
gtcgtgtctcaaattgcgaagccggatatgaacagcgaacagttgatccgtgaagcgcta
aaatcaatggtgtaa
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