Vibrio sp. dhg: DBX26_07965
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Entry
DBX26_07965 CDS
T11094
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vid Vibrio sp. dhg
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vid03000
]
DBX26_07965
Transcription factors [BR:
vid03000
]
Prokaryotic type
Helix-turn-helix
Other families
DBX26_07965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
nSTAND6
HTH_22
PAS_7
HTH_7
PAS_9
HTH_23
MCM
HTH_29
HTH_Tnp_IS1
PAS_8
PAS_GdpP
Diguanyl_cycl_sensor
HTH_50
HTH_17
DUF2089
HTH_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AXT70976
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All DBs
Position
1:1730645..1732402
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AA seq
585 aa
AA seq
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MEIQPITDNNWLSTSWLRSEQAGLKQRRLPEDVRVNSATLKDRRHQLNFLLDAVKQFALP
LFNQIFAHSNSRLILTDADGVIIGSWGKPRFREKLTEIALSSGACWQEKLKGTNAIGTAL
VEAKPVSVIGDQHFIQHHRFISCSANPIFDHLGRLLGVLDITSEQEKHDLSTQVLVQNMV
QLVENQMLNQIPSGHIRVDLACDQNLLNSGWQGIIIADEAGEILAHNQVASQLLDRSTVV
GQSLEEILAHQNSDQPIVFKTAPLSKTKIQSRSLSASNDLHFGDSKVEHCWQQANRVIDK
DISLLILGETGVGKNEFVKALHKNSQRKNGPLVAVNCGALPKDLIESELFGYVAGAFTGA
NSKGYQGKIRQAHKGTLFLDEIADLPIAAQSRLLHVLQDKTVLPVGSNQSVQVDTQIIAA
THKDLEALVEQGEFRQDLYYRLNGLIIELPRLEERQDKQKLIESLHRRHAEPNQHLCPHL
LALLLSYSWPGNLRELDSLIKVSALMAQGEAVLELAHVPTHLSKKLSQIQQQASAEPTTD
IRTTVEDKLVKTYQANQGNISKTSRMLGVSRNTIYRKLKSMGMIK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaacctattacggataacaactggctttcgacttcttggctcagaagcgaa
caagcgggtctaaaacagcgccgactcccggaagatgtccgtgtcaactcggcgacactt
aaggacagacgccaccaattgaattttctgctcgatgcagtaaagcaatttgcgctgcct
ctctttaaccaaattttcgcacacagcaatagtcggctgattcttacggatgcagatggc
gtgatcattggtagttggggaaaaccaagatttagagagaagctgaccgaaattgccctt
agctcaggagcctgttggcaggaaaagctgaaaggtacaaacgccatcgggactgctttg
gttgaagctaaaccagtctcggtaattggcgatcaacactttattcagcaccatcgtttc
atcagttgctctgcaaatcctattttcgaccatctaggcaggctccttggggtcttagac
atcaccagcgaacaggaaaagcatgacctatccactcaagtgctcgtgcagaatatggtt
cagctggtcgaaaaccaaatgttaaatcagattccaagtggtcatattcgggtcgattta
gcctgcgaccaaaatctcttaaacagcggctggcaaggcataattatcgccgacgaagca
ggtgaaattttggcacacaaccaagttgcctcgcagttactcgaccgcagcacagtggtg
ggtcaatcattagaagaaattttagcgcatcagaactcagaccaacctatcgtattcaaa
acggcaccactctcaaaaacaaaaatccagtcccgctccttaagtgcctccaatgatctt
cattttggcgactcgaaagttgaacactgttggcaacaagcaaaccgcgttatcgataaa
gacatcagtttattgatactgggtgaaactggcgtcggtaaaaacgagtttgtgaaagcg
ctgcataaaaatagccagagaaaaaacggccctctggtagctgtcaactgtggtgcactg
cctaaagatctgattgaatccgagttgtttggctatgttgcgggagcctttaccggggca
aacagcaaaggctatcagggtaagatccgtcaagcccacaaaggcacactatttctcgat
gaaattgctgacttaccaatcgctgcacaaagccgccttctacatgtacttcaggacaaa
accgtacttcctgttgggtccaatcaaagcgttcaggtggatactcagattattgcggca
acacacaaagatcttgaagccttggttgaacagggcgagttccgacaagatttatattat
cgcctgaatgggttgatcatcgagttgcctagattggaagagcgacaagacaagcagaag
ctgattgaaagtcttcaccgccgacatgcggaaccaaatcaacacttatgccctcaccta
ttagctctgctgctctcatattcgtggccgggtaacttgcgagagctcgatagtctgata
aaagtttctgcactaatggcacaaggtgaggcggtgttagagcttgctcatgtcccaact
cacttatctaagaaacttagccagatacaacaacaggcaagcgcagaaccgactacggat
atacgtactacagtcgaagacaaactggtaaaaacctaccaggccaatcaagggaacatc
agtaagacatctcgtatgctcggtgtgagccgaaatacgatttatcggaaactgaagagc
atgggaatgattaagtag
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integrated database retrieval system
