Vibrio sp. dhg: DBX26_09430
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Entry
DBX26_09430 CDS
T11094
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
vid Vibrio sp. dhg
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
DBX26_09430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_14
TPR_2
Zn_ribbon_LapB
TPR_12
TPR_8
TPR_1
TPR_20
TPR_16
ARM_TT21_5th
TPR_Slam
ANAPC3
ARM_TT21_N
ARM_TT21_C
TPR_CcmH_CycH
TPR_15
TPR_11
ARM_TT21
TPR_5
DUF2989
TPR_P4H
TPR_9
SPG48
Zn_ribbon_15
DUF6416
DUF7129
TAF1_subA
Motif
Other DBs
NCBI-ProteinID:
AXT71251
LinkDB
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Position
1:complement(2053407..2054582)
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AA seq
391 aa
AA seq
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MLELLFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYMTGLNLLLSDQSDKAVDHFIE
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVS
GFLDRAEKIFEQLVEEPEHREGALQQLVTIYQQTREWEKAIHYANQLAKMSNKRSRMRAN
IAHYWCEIAMLDQADGNKSKAVQHFKKALSEDPKCVRASIALGRMYLESEDYKQTIKYLT
SILEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVSAELMLAQLVAHHESV
GAAQELLTKQLLKNPTMKGFYRLIDYHIAEAEDGRAKDSLSTLQAMVGEQLKVKPHYRCR
KCGFSTHSLYWHCPSCKGWGTIKPIRGLDGE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactactcttcttgttattgcctatagctgctgcgtatggctggtatatgggg
catcgcagcgctcaacaagacaagcagaagcaatcacatcaaatttctcgtcaatatatg
acgggtctgaacttactgctttctgatcaatcagataaagcagtagaccactttattgaa
ttgctccaagtagataacgaaaccatagatacccaccttgcgttgggtaatctttttcgt
tctcgtggagaagtcgaccgcgcaattcgtattcaccaaaatcttatttcccgctcgggt
ctgactcttgaccagaaaaatctcgcccttcagcaacttgctaaagactacatggtttct
ggttttctggatcgtgcggaaaagatatttgaacagttagtcgaagagccagagcatcga
gaaggtgcacttcaacagcttgtgaccatttaccagcaaacgcgtgaatgggaaaaagcg
attcactacgctaaccagctagcaaaaatgagtaataagcgctctcgaatgcgagcgaat
attgctcactattggtgtgaaattgccatgctagatcaagctgatggcaataagagcaaa
gcggttcagcatttcaaaaaagcactctcggaagacccaaaatgtgtgcgtgccagtatt
gctttgggccgtatgtatttagagtcggaagattacaaacaaaccattaaatacttaact
tcaatcctggagcaagacaaagactttattagcgatgttttgcctacgattgcagagtgc
taccaccacttagggcaagaagatgagctggtggaattccttcgggcttgtatcgataag
aaagccggagtgtcagcagaattaatgctggcacagctggttgcgcatcacgaaagtgtg
ggcgcagcacaggagctgttgaccaagcagctactgaaaaatccgaccatgaaaggtttc
taccgtctgattgattaccatattgcagaggcggaagacggtcgtgcaaaagacagtctt
tcaaccttacaagccatggttggtgaacagctaaaagtgaaacctcattatcgatgcaga
aaatgtggtttttctactcattccctgtattggcattgcccgtcttgtaagggatgggga
acgatcaagccaatccgtggattggatggtgagtaa
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