Vibrio sp. dhg: DBX26_09800
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Entry
DBX26_09800 CDS
T11094
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vid Vibrio sp. dhg
Pathway
vid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DBX26_09800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vid03400
]
DBX26_09800
DNA repair and recombination proteins [BR:
vid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBX26_09800
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DBX26_09800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXT71316
LinkDB
All DBs
Position
1:complement(2136929..2138959)
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AA seq
676 aa
AA seq
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MSKVYELVSSYQPSGDQPDAIKQLLDGLDSGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPESYLQMMLHLRRGDVIDQRDMLRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRVEMFDDEVDCISVFDPLTGVVKQRDLP
RYTIYPKTHYVTPRDRVLEAIENIKVELEVRKKQLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFESLAPQTIFVSATPGNYELEKSDGDIADQVVRPTGLL
DPILEVRPVATQVDDLLSEIRIRAVKDERVLVTTLTKRMAEDLTEYLHEHDVRVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNIEGKAILYADSITKSMKKAMDETNRRREKQQAYNEEMGIVPQALTRNIKDIMEL
GDITKSKRQRTGKQVPLSKVAEPSQSYEVMSPQQLEKEISRLEAAMYQHAQDLEFELAAE
KRDEIEKLRAQFIANS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtttatgagctggtttctagttatcagccatcaggagatcaacccgatgca
attaagcaattacttgatgggttagactcgggtttagcacatcagacactgttaggtgtg
acaggttcaggtaagacattcacattagcgaatgtgatcgctcaagcgcaacgtcctgca
attttgctcgcacctaacaaaactctggccgcgcagctttatggagagatgaagtcattt
ttcccgaataatgcggttgagtatttcgtttcttactacgattactaccagccagaagct
tatgtgccaaccaccgatacgtttatcgaaaaagacgcatctgttaacgctcacattgaa
cagatgcgattatccgcgaccaaagcgttattagagcgtaaagatgccattatcgtcgcg
tcggtctctgccatttacggtttgggtgatcctgagtcttatctgcaaatgatgttgcat
ttacgtcgtggcgacgtgatcgaccaacgtgacatgcttcgtcgcttggctgagctgcaa
tactcacgtaacgatgtagcctttgagcgaggccagtttcgcgttcgtggtgaagtgatt
gatatctttcctgctgaatccgatcaagatgcagttcgagttgaaatgtttgatgacgaa
gtcgactgcatcagcgtgtttgacccacttaccggagttgtgaaacagcgcgatttaccg
cgttataccatctatccgaaaacgcattacgttacgcctcgcgatcgcgtcctagaagcg
atagagaatatcaaagtggaactcgaagtacgtaaaaagcagttattggacaacaataag
ctgttggaagaacaacgtatcagtcagcgcacacagttcgatatcgagatgatgaatgag
cttggattctgctcgggaatcgaaaactactctcgttacctcagtggtcgcgctgaggga
gagccgccaccgacactttttgattatctaccacatgatggtttattgattattgacgag
tcacacgtaaccgtcccacaaattggcgccatgtataaaggtgaccgttctcgtaaagaa
acgttggtggaattcgggtttcgtttaccttcagcactggataaccgcccgcttaaattt
gaagagtttgaatcgcttgcgccgcagactatttttgtttctgcgacaccgggtaactat
gagctcgaaaaatccgatggcgatattgctgatcaagttgttcgccctacgggattactt
gatcctatactggaagttcgtcccgtcgcgacgcaggtcgatgatctgctttccgagatt
cgtattcgtgcggtgaaagatgaacgagtcctcgttacaacgttgaccaaacgtatggca
gaagatttgaccgaatatctgcatgaacacgatgtgcgtgtccgttatcttcactccgat
attgataccgtagagcgtgtcgagattattcgagatcttcgactaggcgaatttgacgtg
cttgtcggtatcaacttattacgagaaggtttggatatgccggaagtgtcgctggtggcg
atattggatgctgataaagaaggcttcttgcgctcggaacgctcactgatccagactatc
ggccgtgctgctcgaaacatcgaaggtaaggccattttgtatgccgactccatcaccaag
tcgatgaagaaagcgatggatgaaaccaaccgtcgtcgtgagaagcagcaagcgtacaat
gaagaaatggggattgtaccgcaggcattgacgcgcaatatcaaagacatcatggagcta
ggtgatatcactaagtccaaacgtcagcgcactggcaaacaggttccattatcgaaagtc
gcggagccgtctcagtcttatgaagtcatgtcgccacaacagttggaaaaagaaatcagc
agactggaagcagcgatgtaccagcatgctcaagaccttgagtttgagctggcggctgaa
aaacgtgatgagattgaaaaactgcgtgctcagtttatcgctaatagctga
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