Vibrio sp. dhg: DBX26_10215
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Entry
DBX26_10215 CDS
T11094
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vid Vibrio sp. dhg
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vid03016
]
DBX26_10215
Enzymes [BR:
vid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
DBX26_10215
Transfer RNA biogenesis [BR:
vid03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DBX26_10215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_8
Mqo
Pyr_redox
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AXT71390
LinkDB
All DBs
Position
1:2230033..2232051
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AA seq
672 aa
AA seq
DB search
MTSIKNAELGWNESGTPVSDQFDDVYFSNVNGLEETRYVFLKKNHLPERWQEFDQRRFVI
GETGFGTGLNFLAVWQWFNEFRRENPDAALKELHFVSFEKYPLSQTDLIKAHQAWPELAE
YAAKLQKHYPAAVPECHRIVLEDGAITLDLWFGDIKDCMPQVPYGESGLIDAWFLDGFAP
SKNPEMWNQNLFNGMAKLAKQDCTVATFTAAGFVRRGLIEAGFTMTKVKGFGTKREMIAG
TMEQRQTHTNHLPWFNRTAASHSDSIAIIGGGIASATLAKTLSRRGQNVTLYCKDVRPAE
GASGNRQGAVYPLLNGPHTGVSRVFAPAFLFARQFIEQTAEEISFDHEWCGVTQLMWDEK
STAKLERILEGNFTPELIQKLSAEETAEAIGLPIDMPSVHYPLGGWLCPAELTRGLIAQL
EKNDNFEAKFEHKIDALTWNEESQSWALTSNGQTFEHSTVVIANGHEFQTLSQTADLPMG
QVKGQVSHAPATETLSKLKSVLCYDGYMTPVNPKNNQLCIGASYDRSHLDYEFDAEAQRD
NADKLVKCVPNQTWTNEVDITGNLSRQGIRCVSRDHLPFIGNVSDFESVKTQYANLQNQK
EEEVEAIHQFPNLFCFLGLGSRGLSSAPLMAELLASQICGDPLPLPVEVLAELHPSRMWV
RKLRKGKAITEL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataaaaaacgcagaactgggttggaacgaatctggtacgccagtttctgac
caatttgatgatgtttacttctctaacgtaaacggtcttgaagagacacgctacgttttc
ctcaaaaaaaatcatctcccagaaagatggcaggagtttgaccaaagacgctttgtcatt
ggtgaaaccggatttggcactggattaaacttcctagcggtatggcagtggtttaacgaa
tttcgtcgtgaaaaccctgatgcagcgttaaaagagctgcattttgtcagtttcgaaaag
taccctctgagtcaaacggatctaataaaagcccatcaagcgtggccagaactagcagag
tatgccgcgaaacttcaaaagcactacccagcagcagtaccagagtgccatcgaatcgta
ttagaagatggcgcaatcaccctcgacctgtggtttggtgatatcaaagactgcatgcca
caagtaccttatggtgaatcaggcttgatcgacgcttggttcctggatggttttgcacct
agtaaaaacccagagatgtggaatcagaatctgttcaacggtatggcaaaactggccaag
caagattgtactgtcgcgacatttactgctgcaggctttgtgcgtcgtggcttgattgaa
gcaggctttaccatgacaaaagtaaaaggctttggtaccaaacgtgaaatgatcgctggc
acaatggaacagcgtcaaacccacaccaatcacttaccctggtttaaccgaacagcggca
agccattctgactcaatagccatcattggtggtggcatagcaagcgcaaccctggcaaaa
acattaagccgtcgtggtcaaaacgtcacactgtattgtaaagatgttcgaccagcagaa
ggggcatcgggtaaccgacaaggcgccgtttatccactacttaatggccctcacactggt
gtgtcgcgtgtgtttgctcctgcctttttattcgctcgtcagtttattgagcaaacggcg
gaagaaatcagttttgaccatgaatggtgtggcgtcacccaattgatgtgggatgaaaag
tccacagctaagttagaaaggatattagaaggcaacttcacgcccgagctcattcagaaa
ctttcagcagaagaaacggctgaagctattggcttgcctatcgatatgccttcagtgcac
taccctttgggtggttggctttgtcctgcggagttaactcgtgggctgatcgctcagctt
gaaaaaaatgacaatttcgaagccaagtttgaacacaaaatcgacgcgctcacttggaat
gaagaaagtcaaagctgggcactaacatcgaatggccaaacctttgagcattctactgtc
gtgattgccaatggccatgagttccaaacgctgagccaaacagccgatctgcctatgggc
caagtgaaaggtcaggtcagccacgcaccagcgacagaaacgctgtctaagctgaaatcg
gtgctttgctacgatggctacatgacgcctgttaacccaaagaataatcagctctgcatt
ggcgcaagttacgatcgcagccacttggattacgagtttgatgccgaagcgcaacgcgac
aatgctgacaagcttgtcaagtgtgtgccaaatcagacatggaccaacgaggtcgacata
acaggaaacttatcacgccaaggaattcgctgtgtgagtcgcgaccacttgccatttatt
ggtaatgtaagtgattttgagtcagttaaaacacaatacgcaaacttgcaaaaccagaag
gaagaggaagttgaagcaattcatcagttccctaacctattctgctttttaggtctgggt
tctcgtggattgagctctgcaccactgatggctgaactgctggcttcacaaatttgtggc
gaccctctgccactgcctgtagaagtgttagctgaattgcatccaagtcggatgtgggtt
cgtaagctgcgcaaaggtaaggcgattactgaactttag
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