Vibrio sp. dhg: DBX26_10275
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Entry
DBX26_10275 CDS
T11094
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vid Vibrio sp. dhg
Pathway
vid00071
Fatty acid degradation
vid00280
Valine, leucine and isoleucine degradation
vid00310
Lysine degradation
vid00362
Benzoate degradation
vid00380
Tryptophan metabolism
vid00410
beta-Alanine metabolism
vid00640
Propanoate metabolism
vid00650
Butanoate metabolism
vid00907
Pinene, camphor and geraniol degradation
vid00930
Caprolactam degradation
vid01100
Metabolic pathways
vid01110
Biosynthesis of secondary metabolites
vid01120
Microbial metabolism in diverse environments
vid01200
Carbon metabolism
vid01212
Fatty acid metabolism
Module
vid_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DBX26_10275
00650 Butanoate metabolism
DBX26_10275
09103 Lipid metabolism
00071 Fatty acid degradation
DBX26_10275
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DBX26_10275
00310 Lysine degradation
DBX26_10275
00380 Tryptophan metabolism
DBX26_10275
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DBX26_10275
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DBX26_10275
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DBX26_10275
00930 Caprolactam degradation
DBX26_10275
Enzymes [BR:
vid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DBX26_10275
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DBX26_10275
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DBX26_10275
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
AXT71401
LinkDB
All DBs
Position
1:complement(2241614..2243725)
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AA seq
703 aa
AA seq
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MSEQKAFSLKIDEQNIAWLAIDVPNEKMNTLQAAFVEEMQEIFAQLKDSTGVKGVIIHSL
KPDNFVAGADVRMLDACTTASEAEALAKQGQELFQQLSDLPYPVVAAIHGPCLGGGLELA
LACDYRVCTESDITRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAK
KLGVVDACVPETILLDVAKQFIDKGKSKGKKKQSTKEKLMSGSGLGRKFVFEQAAKKTNE
KTRGNYPATVAILEVIQHGLEKGFVKGQELEAKRFGELVMSSESKALRSIFFATTEMKKE
HGTDAKPAAVKKVGVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALNYNYKLFDK
QRKRRILSKADLQAKMMQLSGGVDFTSFNQIDVVIEAVFEDLDLKQQMVADIEANAKPDT
IFATNTSSLPIHKIAEKAKRPENIVGLHYFSPVEKMPLVEVIPHETTSDETISTVVALAK
KQGKTPIVVKDKAGFYVNRILAPYMNEAAHILLANEPIEKIDNALLDFGFPVGPITLLDE
VGVDIGAKIMPILVNELGERFKGPDVFDTLLNDGRKGRKSGKGFYTYKGKKKEVDKSVYK
LLKLEPESKLSDNDIALRCVLPMLNEAVRCLDDGIIRSPRDGDIGAIFGIGFPPFLGGPF
RYMDQYGLKELVEKMNEFASKYGDRFAPCDGLLTRAGEERTFY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaaaagcatttagtctaaagattgacgagcagaatatcgcctggttggcc
attgatgtgcctaatgaaaagatgaacacgctacaggcggcttttgttgaagaaatgcag
gaaatcttcgcgcagctaaaagactcaactggagtcaaaggggtgattattcattccctg
aagccagataactttgttgcgggtgccgatgtacgcatgcttgacgcatgtaccaccgca
agcgaagcggaagcattggcaaaacaaggacaagaactcttccaacaattgtctgacctg
ccttatccggtcgttgctgctattcatggcccttgtctcggaggtggcttagagcttgct
ctggcgtgtgactatcgcgtttgtacggaatccgacatcactcgtttaggtctgccagaa
gtacagttaggcttgctaccaggctctggtggtacacagcgacttcctcgactaattggt
ctgctaccttcacttgatttaatcctgacgggtaaacagctccgcgctaaaaaagcgaaa
aagcttggagtagtagatgcctgtgtaccagagactattttgcttgatgtcgctaagcaa
tttatcgacaaaggcaaaagcaaaggtaagaaaaagcagtcgaccaaagaaaagctgatg
tcgggcagcgggttagggcgaaagtttgtatttgagcaagccgcgaagaaaaccaacgaa
aaaacccgaggcaattatcctgctacagtggcgattttggaagtgatccagcatggtttg
gagaaagggttcgttaaaggccaggagcttgaagcgaagcgcttcggcgaactggttatg
agctcagaatcgaaagcgctgcgttccatcttctttgctaccacagagatgaagaaagaa
cacggcacggatgctaagcctgcagccgtgaaaaaagtcggtgtacttggtggtggtttg
atgggcgctggcattagtcatgtctccgttgcgaaagctaaagtgccggttcgcattaaa
gatgtgagcaatgacggggtcttaaatgcgctgaactacaactacaagttgttcgacaag
caacgtaagcgtcgcattctctctaaagcggatctccaagcaaaaatgatgcagctttcg
ggtggcgtagacttcaccagtttcaaccagattgatgtagttattgaggcggtgtttgaa
gaccttgatttgaaacagcaaatggtcgcggatattgaagcaaacgcgaagccagatacc
atttttgcgaccaacacatcgtcactgccaatccataaaattgcagaaaaagctaaacgt
ccagagaatattgtcggtctgcactatttcagtccggtagagaaaatgccgctggtggag
gttatcccgcatgaaaccacatcagacgaaaccatttctacggttgttgcgttagccaag
aaacagggcaaaacgccaatcgtagtcaaggacaaagctggcttctacgtaaaccgcatt
cttgcaccttacatgaacgaagctgcgcatatcttgctggcaaacgagccgatagaaaag
atagataacgcgttactggattttggcttcccggttgggccaatcacactgcttgatgaa
gtaggcgtggatattggcgctaaaatcatgccgattctggtcaatgaattgggcgagcgt
ttcaaaggtccggatgtattcgatactttgcttaacgacggtcgtaaaggccgtaagagt
ggcaaaggcttttacacctacaaaggtaagaagaaagaagtcgataagtctgtctataag
ctattgaaacttgagcctgagtctaagctcagcgacaacgatattgccctgcgctgtgtg
ctgccaatgttgaatgaagcggtacgctgtttagatgacggtattattcgttcgccacgc
gatggtgatattggtgcgattttcggtattggcttcccacctttcttgggtggtcctttc
cgttatatggatcagtatggcttgaaagagctggtcgagaaaatgaatgaatttgcatcg
aaatacggtgaccgatttgcaccttgtgacggcttactcacccgagcgggtgaagaacgt
acgttttattaa
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