Vibrio sp. dhg: DBX26_10755
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Entry
DBX26_10755 CDS
T11094
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vid Vibrio sp. dhg
Pathway
vid03030
DNA replication
vid03430
Mismatch repair
vid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBX26_10755
03430 Mismatch repair
DBX26_10755
03440 Homologous recombination
DBX26_10755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vid03032
]
DBX26_10755
03400 DNA repair and recombination proteins [BR:
vid03400
]
DBX26_10755
Enzymes [BR:
vid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBX26_10755
DNA replication proteins [BR:
vid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBX26_10755
DNA repair and recombination proteins [BR:
vid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBX26_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AXT71494
LinkDB
All DBs
Position
1:complement(2333512..2336991)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRVHSDFSMVDGISKVPPIVKKVAELGMPAMALTDFTNLCGLVKFYGTAHGC
GVKPIIGADFKMQSDEFGEELTQLTVLAADNVGYKNLTLLISKAYLRGHIQHQPVIDKSW
LAEMSEGLIVLSGGKNGDIGKALLKGNRNLVQSCVEFYKQHFPDRYYLELLRTGRPDEET
YLHFAVELAEQVDLPVVATNEVVFLSSDLFDAHEIRVAIHDGYTLEDPRRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMKETEFLVMKSREGL
EERLEFLFPDEEERKKRRPEYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLIPPDPGMTLDKAFKAEPA
LPELYEADEEVKELIDMCHILEGCTRNAGKHAGGVVISPTTITDFAPIYADSEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEREGKAPVRIESIPLDDQASFRLL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRATFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKMHYPA
EFMAAVMTADMDNTEKVVGLVDECFRMKLTVLPPDINSGLYRFNVDENGAIVYGIGAIKG
VGEGPIDAILEARNKGGHFKDLFDFCARIDLKRVNKRVIEKLIYAGALDRLGPHRAAMMA
SLNDAVKAASQHHQAEAFGQADMFGVLTDAPEEVEHKYTQVPPWPEKVWLEGERETLGLY
LTGHPINAYLKELNKYTSCRLKDATPTRRDQSVTVAGLVIAARVMTTKRGTRIGIMTLDD
RSGRMEVMLFSDALDRYAELLEKDRILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSVSIDANQINDQFFEQFSRILEPHKAGTVPVNVYYQRADARARLTLGTEWRVTPSDT
LIDDLKQLLGTNQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcccaagttcattcaccttcgagttcacagtgatttttcgatggtggatggt
atcagcaaagttccaccgatagttaagaaagtcgccgagcttggcatgcctgcaatggca
ttgaccgatttcactaacctgtgtggtttggtgaagttttacggcacagcacatggctgc
ggtgtaaaaccgatcatcggtgcagatttcaaaatgcaatctgacgagttcggcgaggag
ctgacacagctaacagtactggcagccgataatgtcggttacaaaaacctgacgctgctt
atctccaaagcgtatttacgtggtcatatccagcatcagccagtgattgataagtcttgg
ttagccgagatgtcagaagggttaatcgttctttctggcggtaaaaatggtgatatcggc
aaagcgttactaaaaggtaaccgcaacttagtccagagctgtgtagaattttacaaacag
cactttccagatcgttattacctagaattactccgcactggccgtccggatgaagaaacc
tacttgcacttcgccgttgaactggcagagcaagtggatctgcctgttgttgcaacaaac
gaagtggtcttccttagttctgatttgtttgatgcccatgagattcgcgtagcgatccat
gatggctacacattagaagatcctcgcagaccaaaaaactacagcccacagcaatacctc
cgcagtgaggaggaaatgtgtgagctgtttgcggatattcctgaagcactggaaaacagt
gttgagatagccaagcgttgtaacgtcaccgttcgtttgggtgagtacttcctgcctgcg
ttcccaactgagggaatgaaagagactgaattcttggtaatgaagtctcgcgaaggtctg
gaagagcgtctggagttcctgtttccggatgaagaagaacgcaaaaagcgtcgtcctgaa
tacgatgaacgtttgcaaatcgagctggatgttatcaaccagatgggcttcccgggatac
ttcctgatcgtaatggagttcatccagtggtcgaaagacaatgatattcctgtaggtcca
gggcgtggttcgggtgcgggctctctggtggcatacgcactgaaaatcacagaccttgac
ccactagaatatgatcttctcttcgaacgtttcttgaacccagaacgtgtatccatgccc
gatttcgatgtcgacttctgtatggataaacgagaccaggtgattgatcacgtagcagaa
atgtacggtcgcgatgcggtatctcagatcattacctttggtacgatggctgccaaagcg
gtaattcgtgatgtgggccgtgtcctaggtcatccgtttggttttgtcgaccgaatctcg
aagcttatcccgccagatccgggtatgacgctggataaagcattcaaagctgagccagca
cttcctgagctctatgaggcagatgaagaagttaaagaactcatcgacatgtgccacatc
ttggaaggttgtacgcgaaacgcaggtaagcacgcgggtggtgttgttatttcaccaacc
acgattacggacttcgcgccaatttatgcggattcagaaggtcatttcccggtaacacag
tttgataagaacgacgttgaaactgcgggtttggttaagtttgacttccttggtcttcgt
acactgaccattattgactgggcgcttgggttgattaacccgcgtttagaacgtgaaggt
aaagcgccggttcgtatagaatctatcccgctcgacgatcaggcatcgttccgcttgtta
caaaactcagaaaccaccgccgtattccagttggaatcgcgtgggatgaaagagcttatc
aagcgacttcagccagactgttttgaagacattatcgcactggtggcacttttccgtccg
ggtccattgcaatcaggcatggtagataactttattgaccgtaaacacggtcgggaagcg
atctcttaccctgatgaaaagtggcaacacgagtcattaaaagagattctcgatccgact
tacggcattatcctgtatcaggaacaggtaatgcagatcgcgcaggtactgtctggctac
acgcttggtggcgcggacatgcttcgtcgtgcgatgggtaagaagaagccggaagagatg
gccaagcagcgtgctaccttcgaggaaggcgcggtaaagaatggcgtcgacggcgagttg
gcgatgaaaatcttcgacttggtagaaaagttcgctggctacggctttaacaaatcgcac
tctgccgcatacgcattggtttcttaccaaacgttgtggctaaaaatgcattatccagca
gaatttatggctgcggtaatgacagccgatatggacaacactgagaaagtggttggtctg
gtcgacgaatgtttccgtatgaagcttaccgtactgccaccggacattaactcagggctg
tatcgctttaatgttgatgaaaacggcgctattgtttacggtatcggtgcgataaaaggc
gtgggtgaaggtccaattgatgcgattttggaagcgagaaacaaaggtggtcactttaaa
gacctgtttgatttctgtgctcgaatcgatctgaaacgtgtgaacaaacgtgtcattgaa
aaattgatttatgcaggtgccttagacagacttggtccacatcgtgctgcgatgatggca
tcactcaatgatgctgttaaagccgcaagccaacaccatcaggcagaggcatttggtcag
gcggatatgtttggtgtactgactgatgcacctgaagaagtggagcacaaatatacccag
gttccgccttggccggaaaaagtttggctagaaggtgaacgcgaaactcttggtttatat
ttgactgggcacccgattaacgcgtatttgaaggaactaaataaatacaccagttgtcga
ctaaaagacgcgacaccaacacgtcgtgatcaatcagtgacggtagctggtttagtcata
gccgctcgtgtgatgacaaccaagcgtggaacacgtattggtatcatgacattggatgac
cgaagtggtcgaatggaggtaatgctattctccgatgcgcttgatcgatatgctgaactt
ctcgaaaaagacagaattttggtcgtttcaggacaggtcagctttgatgacttcaatggt
ggccttaaaatgtcggcgcgtgaagttatggatctcggcagcgcgcgtgaaaaatacgct
cgtggtctgtcggtatcgattgatgcaaatcagatcaatgatcaattctttgagcagttc
agtcgtattttagaaccgcacaaagccggaaccgtacccgtcaatgtatactaccagcgt
gccgacgccagagcgcggttaacattgggcaccgagtggcgagtaacgccaagtgataca
ttaatagacgatttaaaacagttacttggaacaaaccaggtagaacttgaatttaactaa
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