Vibrio sp. dhg: DBX26_11090
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Entry
DBX26_11090 CDS
T11094
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vid Vibrio sp. dhg
Pathway
vid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DBX26_11090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vid03400
]
DBX26_11090
Enzymes [BR:
vid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DBX26_11090
DNA repair and recombination proteins [BR:
vid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBX26_11090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
Helicase_RecD
AAA_11
SLFN-g3_helicase
UvrD-helicase
Viral_helicase1
AAA_22
nSTAND3
AAA_16
UvrD_C
CbiA
DEAD
AAA_28
MukB
ResIII
TrwB_AAD_bind
DUF87
T2SSE
NTPase_1
AAA_7
Herpes_Helicase
SRP54
RNA_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
AXT71557
LinkDB
All DBs
Position
1:complement(2398763..2400922)
Genome browser
AA seq
719 aa
AA seq
DB search
MTTNNNLPSHQESLLATLERLAHKGAIRQLDYQFARFLYAQTDDAQSESQSDGQALAFIA
GVVSSELGKGHICLPLFDAQGQPTDLASKLGLFGEAALTLNTQLQGINWQQLLENSSLVG
AQGEALPLMFDGERLYLHRYWYYEVTLAEKLNQLGAAVSLQPQEFTRLSELLNHLFARQY
HFLFNTIAKATEAGSSTQVLRQQLVCDHLDVVASDALDWPAIDALLSHANKVQDLQPLDG
LVPLSACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQAAQEKNLTIKLV
APTGKAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLH
LDILVIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYG
KEQASAIAKLTGFDTLAHSSNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNLGSAASV
DNVWARDFSDIEHFALSSQNYNQMMQTLVQEYGRYLKRIGQQEQDPNTGEPETLTRKAKA
VLDTFNQCRLLCAIREGDFGVAGLNQRIEKALAARKLIKVQDEIWYHGRPVMVTRNDHGL
GLYNGDIGICMRDDSEEEQRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFD
YTLMILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIKVKTTRASGLVQRLAN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaataacaatcttccatcgcaccaagagagcctgctggcaacacttgaacgg
ttagcacacaaaggtgcgattcgtcagctcgactaccaattcgcacgttttctttacgct
caaactgatgatgcgcagagtgaatcacaatcagacggtcaggcactggcgtttatcgct
ggtgtcgtcagtagtgagcttggtaaaggacatatctgtttgcctctcttcgatgcgcaa
ggtcagccgactgatttggccagtaagttggggctgtttggtgaggcagcgttaacgctc
aatactcaactgcaaggtattaattggcaacaattattggaaaattccagtttagttggc
gcacagggagaagcgctgccgctaatgttcgatggtgagcgtttgtatttacatcgttac
tggtactatgaagtgacactggcggaaaagctcaatcaactgggcgcggcggttagtttg
cagccgcaagagtttacgcgattatctgagctgcttaaccatctgtttgcgcgtcaatat
cactttctttttaacacgattgccaaagccactgaagctgggagtagcacccaagttctg
cgtcagcaattggtgtgtgaccaccttgatgtggtcgcaagcgatgcattggattggcct
gcgattgatgcacttttaagccacgccaataaagttcaggacttacaacctctggatggc
ctcgtgccactttctgcttgtgtaaactggcaaaaagtcgcggccgcagtcgcgctaacc
cgtcgctttgcggtgatttctggtggaccgggaaccggtaaaacgactacggtaaccaaa
ttgcttgccgcgctgatagagcaggccgcacaagagaagaatctaaccatcaagctggtg
gctccgacgggtaaagcagctgcacgattaaccgagtcaattggcaaagcagtgcaagag
ttaccggtttctcctgagttaaaagccaaaatcccgactgaatcgagcaccttgcaccgt
ttgttgggcgcgatccctaatagcgcagagttccgtcataacaaacagaatccgctgcat
ctggatatcttagtcattgatgaagcgtcgatggtcgatttacccatgatgtacaaagtg
gtcgatgcattgcctaagcatgcacgactgatcctgcttggtgataaagatcagctcgcc
tcggtagaagcgggggcagtgctgggtgatatttgctcgttccatgctttgggttatggc
aaagagcaggcttcggccatcgcaaagctgaccggttttgacaccttggctcacagtagc
aatagtgcatccagcattgctgatagtttgtgtatgctgcaaaagagttaccgatttgat
gctcgctcggggattggccaattagcgaaagcggtgaacttaggttctgcggccagtgtg
gacaatgtctgggcgcgagacttttcagatatcgaacattttgctctgagtagccaaaac
tacaatcagatgatgcagacgttagtacaagaatacggtcgttatctgaagcgtattggg
cagcaagagcaggatccaaatactggagaacctgaaacgttaacccgaaaagccaaagcg
gtgttagacacatttaaccagtgcagactgctttgtgcgatccgcgaaggtgactttggt
gtggctgggttaaaccagcgcatagagaaagcacttgcagcgcgtaagctgattaaggtg
caggatgagatttggtatcacggcagacctgtgatggttacgcgcaatgatcacggttta
ggtttgtataacggtgatattggtatttgtatgcgggatgacagcgaagaagagcagcgt
ttgaaagtctttttcgaactccctgatggtagtgttaagtcggtactgccaagccgagtg
ccagaacatgaaacggcctacgccatgacaattcataaatcgcagggcagtgagtttgat
tacaccttaatgattctgccgccagattttagcccgatattaacccgtgagctgatttac
acaggcatcacccgagcgaagaaacgtttagcgctttacgcggagctgaatgtgcttaaa
cgaggaataaaggtgaaaacaacgcgagctagtggattggtgcagcgactagccaactag
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