Vibrio sp. dhg: DBX26_11925
Help
Entry
DBX26_11925 CDS
T11094
Name
(GenBank) bifunctional diguanylate cyclase/phosphodiesterase
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vid Vibrio sp. dhg
Pathway
vid05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
DBX26_11925
Enzymes [BR:
vid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DBX26_11925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AXT71708
LinkDB
All DBs
Position
1:2580417..2582456
Genome browser
AA seq
679 aa
AA seq
DB search
MPSQQLQHWFATLTSNSPFFFAILDKKHNYRMVSDRYCDIAGLSNAEIIGLNDVHVLGEQ
FYKKLAPYYQRAFDGTHIEAEITLDETDLETSLHFSLSPVYEGNEIRHVVFHAVDTSEKQ
ILVRSLEESESKFAKLTQLLPDGLLLIEEDVIISANPASARLLGINSPHDLLGEKLSRLF
IDENTKKVFGHPLSTLISDKPFICLTSARCGFERKVQLHADSTAILGSASQIILIQDADN
APKNLSASLGEDANIDSLTKLYNRFGFTKRLEQLIKKQTPLLLFYLDIDNFKNINDSLGH
HIGDKVIQEVSARLKRLLPSQAILGHLGSDEFGILLPEPENARMAEILSDRIISLINQPF
DLHHFSKRLACSIGSVRYPEDGQDARILLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAER
AGLIEHLGRVVMRDVFNTVKRWKQQSVLPGRVAINLSPEQFGNPQLIDFMEKLLRTTELD
PSCITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFISDIDTLPKQVTVIENIINLGKSLDLSVVAEGVETHQQATLLSNLQCHSIQGFHFYR
PQPKHEIEELFVQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccagcaattacaacattggtttgccacgctaacctcaaatagccctttcttt
ttcgccatccttgataaaaaacacaattatcgaatggtgagtgatcgctattgtgatatc
gccggattgagtaatgccgagatcatcggactcaacgatgttcacgttttgggagagcag
ttctataaaaagctagcgccttattatcagcgcgctttcgatggtacgcatatagaagcc
gagattactctggatgaaactgatctagaaaccagcctgcattttagtttgtcgcctgta
tatgagggtaatgaaatccggcatgtggtttttcatgctgtcgatacctcagagaaacaa
attcttgtccgctccctagaagagtcagagagcaagtttgccaaactcacccaacttttg
cccgatggtttattacttatcgaagaagatgtgattatttcggcgaatccagcatcggca
aggttgctcgggataaactcaccgcatgatctgcttggcgaaaagcttagccgtttgttc
attgatgaaaatactaaaaaagtcttcggccaccctttaagtacactgatttctgacaaa
ccttttatttgcctaaccagcgcgcgatgtgggtttgagcgtaaagtacagcttcatgct
gattcaacggccattctgggtagtgcctcacaaatcattttgattcaggatgccgacaat
gcacccaagaatttatcggcgtctttgggtgaagatgcgaatattgactccctgaccaag
ttgtacaaccgttttggttttactaaacgcctggaacaactgatcaaaaagcagacacca
ctactgctcttctatctggatatcgataactttaaaaatatcaacgattcactgggccat
catattggtgacaaagtgatccaagaggtctcagcacgcctgaagcgattattaccaagt
caggcaattcttgggcacctggggagtgatgaattcggtattctgttaccggagcctgaa
aatgcacgaatggctgaaattctgtcggatcgcattatttctctgatcaaccagcctttc
gatctacatcactttagtaaacgtcttgcttgttcaattggcagtgtccgctatccagaa
gatggccaagatgccagaattttactgcaaaacgccgatactgcgatgtacgaggcgaaa
gatcgcgggcgaaaccgactgatcaaattcaacgatcaaatgaataaagaagcgcgcatg
cgtttgtggctggaaattgagctacaaaaagcactgcagcaaaatggtttggaagtctgg
tatcaaccaaaagtaaacgcgcgcgatttcagtatcaatggtgcagaagcactggtgcgc
tggaaacaccctgtcgaaggctatattagccctggtgcattcattcctgtcgccgaacga
gcggggttgatcgagcaccttggacgagtggtgatgcgtgatgttttcaatacagtaaaa
cgctggaagcagcaaagcgttttgccagggcgcgtcgcgattaacttatctcctgagcag
tttggcaacccacaacttatcgactttatggaaaagttactgcgcacgacagagctggat
ccaagctgtattacgtttgagctaacagaaagcgccgtaatgagcgacagtgaacataca
ttgcaaatgttaaacgccatcaaaaagctgggatttgccctgtcgattgatgactttgga
accgggtactcgtctctctcttacttagcccgcttccctattgatgagctcaaaatagac
cgcgcttttattagtgatattgacacactgcctaaacaagtaaccgttatcgaaaacatc
atcaacctgggtaaatccttagatttatccgtggtcgcggaaggggtcgaaacccatcag
caagcgacgttgctttcaaacctgcaatgtcactcgattcagggcttccacttttaccgc
ccgcaacctaaacacgaaattgaagagctctttgtacaaaatcgtcgtcacaagaattaa
DBGET
integrated database retrieval system
