Vibrio sp. dhg: DBX26_12200
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Entry
DBX26_12200 CDS
T11094
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vid Vibrio sp. dhg
Pathway
vid00550
Peptidoglycan biosynthesis
vid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DBX26_12200 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vid01003
]
DBX26_12200 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
DBX26_12200 (mrcB)
Enzymes [BR:
vid01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DBX26_12200 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DBX26_12200 (mrcB)
Glycosyltransferases [BR:
vid01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DBX26_12200 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DBX26_12200 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AXT71757
LinkDB
All DBs
Position
1:complement(2653630..2656002)
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AA seq
790 aa
AA seq
DB search
MTNTKKPSTKKAPAKKKTAAKSTATRNKRSPGKKPDNGKRSWLKTLWSFGWKAGVALAAV
LLFVGIYLDSVVKERFDGQLFELPTVVYARILNLSPGENITIKELRNELDVLNYRKVSTP
RYPGEYSSSSTRIELIRRPFEFADGPEPDRHVMLHFSDGGLQRIQSLESKGDLGYLRLEP
KMLGMLEKDQDEQRLFLRRDQFPEILVDALLATEDRNFYQHDGVSPLAIGRALVANIKAG
RTVQGGSTLTQQLAKNLFLTRDKTLWRKLREAYIALILDYRYSKDRILEAYLNEVYLGQS
GGEAIHGFGLASRYYFGQPISELRVDQLAMLVGMVKGPSYYNPIRYPERTKDRRDLVLRL
LMQQNLLTAQEYDQAASRPLDTQSNPRIASRQPAYFQQLNIELKEKVGERFKAETGLRVF
TSLDPVSQSKMEKAIAKKIPELAKRGGKDLEAAAVAVDRHSGEIRAMVGGKRAGYDGFNR
ALNASRPIGSLVKPAIYLTALEQPEKYNLGTTLHDTPLSLKGSEGTVWTPRNYDRKYRGD
VPLYLALAKSLNVPTVRLGMELGIPEVTNTLERLGVSKNEIRPVPSMFLGAFSLTPLEVA
QMYQTLTNSGKRARLTALRSVIDMEGNVLYQSLPRSSREVDEQAAWLTTYAMKQGVAQGT
GRYLQNQFSWAALAGKTGTSNDTRDSWFVGVDGREVTTIWLGRDDNKPTNLTGASGALRV
YAEYLAQRIPERLALPWPREVTTLGFKQTAEGGLEMNCRSEYKLPVWDKTGQVKQQCEKK
SNWINDLFNW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgactaacactaaaaagccaagcacaaaaaaagcgcctgcgaagaaaaaaacagcagcg
aaaagtacggcaacacgtaacaaacgtagcccgggtaaaaagccggacaatggcaaacgt
tcgtggttgaaaacgttgtggtcgttcggctggaaagcgggtgttgcgctggctgcggta
ttgttgttcgtcggaatctatttagatagcgtggtcaaagagcgctttgatggtcagcta
tttgaactgccaaccgttgtttacgcgcgtattctgaatttgagcccgggtgagaatatc
accatcaaagagctgcgcaatgaattggatgtactcaactatcgaaaggtgagcacgcct
cgttatccgggagagtactcttcatcttctacccgcattgaattaattcgtcgtccattt
gagttcgctgatggcccggagccagatcgtcacgtgatgctgcatttctctgacggtggt
ttacagcgcattcagtctttggaatccaaaggggatcttggctatctgcgtcttgaacct
aaaatgctgggtatgttggagaaagatcaggacgagcaacgactgtttttacgtcgagat
cagttccctgaaattttggtggatgcgctactggctactgaagaccgaaacttttatcaa
catgacggtgtttctccgctggccatcgggcgtgcgctggttgcgaatattaaggcaggc
cgcacggtccagggcggcagtacactgactcagcagttggcgaaaaacttatttcttacc
cgcgacaagacattgtggcgtaagctacgtgaagcctacattgcgttgattctggattac
cgctacagcaaagatcgtattctggaagcgtacttaaacgaagtgtacttagggcaaagt
ggcggtgaagcgatccatggctttggtttggcctcgcgttactactttggccagccgatc
agtgagctacgcgtcgatcaacttgccatgttagtcggtatggtcaaaggaccgtcttat
tacaaccctattcgctatccagagcgaaccaaagatcgccgtgacctggtattgcgtctg
ttgatgcaacaaaatctactgacggcacaagaatatgatcaggcagccagtcgtccgctt
gatacgcaaagcaatcctcgtattgccagccgtcagcctgcttacttccagcaattgaac
atcgagctgaaagaaaaagtcggcgaacgttttaaggcggaaacggggttaagagtcttc
acctctctcgatccggtatcgcaaagcaaaatggaaaaagccatcgcgaaaaagatccca
gagttggcgaagagaggcggtaaagatctcgaagctgcagcggtggcagttgaccgccat
agtggtgaaatccgcgcgatggttggcgggaagagagcgggttatgatggatttaaccga
gcgctgaatgcgagccgtcctattggttctttggtgaagcctgcgatttacctgactgca
ctggagcaaccggaaaaatacaatctgggaacaacgctgcatgacacgccactaagtctc
aaaggcagtgaaggcacggtttggacaccgcgtaactacgatcgtaaatatcgtggcgat
gtgccactgtaccttgcgttagcgaagtcgcttaatgtaccaacagtgcgtttgggtatg
gagttaggtattcctgaagtgacgaatacgttagagcgcttaggcgtaagcaaaaatgaa
atccgcccagtgccttctatgttccttggcgcgttttcattgacgccgcttgaggtggct
cagatgtaccagactctgacaaactctggcaaacgagcaaggttaacagcacttcgctca
gttattgatatggaaggaaatgttctataccaatcacttcctcgctcgtctcgtgaggtt
gatgaacaggcggcatggctcaccacttacgcgatgaaacaaggcgttgctcagggtacg
gggcgctatttgcagaatcaattttcttgggctgcattggctggtaaaacaggtaccagt
aatgatacccgcgacagttggtttgtgggcgtggacggtcgagaagttaccactatctgg
ctgggccgtgatgacaacaaaccaaccaatctaaccggcgcaagtggtgctttacgtgtg
tatgccgaatatttggctcagcgtattcctgaacgtttagccttaccttggccacgagaa
gtgacaactctgggcttcaaacaaacagccgaaggcgggttggaaatgaactgtcgtagc
gaatataaactgccggtttgggataaaacaggtcaggtaaagcagcagtgtgagaaaaaa
tccaactggattaatgatttatttaattggtag
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