KEGG   Vibrio sp. dhg: DBX26_14325
Entry
DBX26_14325       CDS       T11094                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vid  Vibrio sp. dhg
Pathway
vid03030  DNA replication
vid03430  Mismatch repair
vid03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DBX26_14325
   03430 Mismatch repair
    DBX26_14325
   03440 Homologous recombination
    DBX26_14325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vid03032]
    DBX26_14325
   03400 DNA repair and recombination proteins [BR:vid03400]
    DBX26_14325
Enzymes [BR:vid01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DBX26_14325
DNA replication proteins [BR:vid03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DBX26_14325
DNA repair and recombination proteins [BR:vid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DBX26_14325
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DEDDh_C
Other DBs
NCBI-ProteinID: AXT72106
LinkDB
Position
1:3074019..3074648
AA seq 209 aa
MNWLQRKYWHYKLKGSPYQSLFCAPDKTELVSLDCETTSLDPNRAELVTIAATKIIDNRI
ITSQPFEVHLRAPQSLDSGSVKIHKIRHQDLVDGISEKYALLKLIDFIGNRPLVGYHIRY
DKKILDLACQRQLGFPLPNPLIEVSQIYHDKLERHLPNAYFDLSLEAICKHLELPIQDKH
DALQDAISAALVFVRLTKGDLPSLSVPYT
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaattggctacaacgaaaatattggcactataaactgaaaggctcgccttatcagtcg
ctattttgtgcaccagataaaaccgagctggtttctctcgactgcgaaaccaccagccta
gacccgaatagagcagagctggttaccatcgcagccactaaaatcattgataaccgcatt
atcaccagccaaccattcgaagtgcatttgcgagcgccacaatctctcgattccggctcg
gtaaaaatccacaaaattcgccatcaggatttagtcgacggcatcagcgaaaagtatgcg
ctattgaaattaatagactttatcggcaatcgtccactcgtcggctatcacatccgttac
gacaaaaaaatcttagacctcgcctgtcaaagacaactgggcttcccgctgcccaaccct
cttattgaagtaagccagatttaccacgacaaactggagcgacatctaccgaacgcctat
ttcgacttaagtctggaggcgatttgcaagcaccttgagctgccaattcaagataagcac
gacgctttgcaagatgcgatatccgcagcattggtatttgttcgtttaaccaaaggcgat
ttaccgagtctcagcgtgccatacacataa

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