KEGG   Vibrio sp. dhg: DBX26_15475
Entry
DBX26_15475       CDS       T11094                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
vid  Vibrio sp. dhg
Pathway
vid03030  DNA replication
vid03430  Mismatch repair
vid03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DBX26_15475
   03430 Mismatch repair
    DBX26_15475
   03440 Homologous recombination
    DBX26_15475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vid03032]
    DBX26_15475
   03400 DNA repair and recombination proteins [BR:vid03400]
    DBX26_15475
Enzymes [BR:vid01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DBX26_15475
DNA replication proteins [BR:vid03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DBX26_15475
DNA repair and recombination proteins [BR:vid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DBX26_15475
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AXT72285
LinkDB
Position
1:3300003..3301103
AA seq 366 aa
MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEENVLSMTATDLEVELVSKVTLE
GDFEAGSITVPSRKFLDICRGLPDDAIITFVLEGDRVQVRSGRSRFSLATLPANDFPNIE
DWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVS
QTELGADFAQKQIIVPRKGVQELVKLMDAPEQPVVLQIGNSNVRAEVNNFIFTSKLVDGR
FPDYRRVLPQSTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITANNPEQE
EAEEMLDVSFDGEPIEIGFNVSYVLDVLNTLRCENVRVSMSDANASALIENADDDSAMYV
VMPIRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaatttactattgaacgtagtcatttaatcaaaccgctacaacaggtctcgggtgct
ttaggtggccgaccaaccctgcctattctgggtaacttactacttaaagtagaagagaac
gtgctttcaatgaccgcgaccgatttggaagtggaattggtgagcaaagtgactctggaa
ggggattttgaagcgggcagcattaccgttccttcgcgtaagtttctcgacatctgccgc
ggtttacctgacgatgcgatcattaccttcgtattagaaggcgatcgcgtacaagttcgc
tctggccgcagtcgtttctcattggcgacgctacctgcgaacgattttccaaacattgaa
gactggcaaagtgaagtagaagtctcactgagccaggctgatctgcgcacactgatcgac
aaaactcagttctcgatggcgaaccaggatgttcgttactacctcaacggtatgttgttt
gaaattgatggcacgacattgcgcagtgtcgcgaccgatggtcaccgtatggcggtgtct
caaactgaactgggcgcggactttgcacaaaagcaaattattgtgccacgtaaaggtgtc
caggaactcgtgaagttaatggatgctccagagcaaccggtcgtattgcaaattggtaac
tctaatgtacgtgctgaagtgaacaactttatcttcacttctaagctggttgatggtcgt
ttccctgactaccgccgcgtattgccgcaaagcaccaacaaaacgttaatcgcaagctgt
gatgagttgcgccaggcattttcacgtgctgcgattttatccaatgaaaaattccgtggc
gtgcgagtgaacctggcagatacggaaatgcgcattactgccaacaacccagagcaagaa
gaagctgaagaaatgctggacgtaagctttgatggcgaaccgatcgaaatcggcttcaac
gtcagctacgtactggatgtgctgaatacgctacgttgtgaaaacgtgcgagtgtcgatg
tcggacgcgaacgcaagtgcgctgattgaaaacgccgacgatgacagtgccatgtatgtg
gtgatgccaatccgtctataa

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