Vibrio sp. dhg: DBX26_15550
Help
Entry
DBX26_15550 CDS
T11094
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vid Vibrio sp. dhg
Pathway
vid00071
Fatty acid degradation
vid00280
Valine, leucine and isoleucine degradation
vid00310
Lysine degradation
vid00362
Benzoate degradation
vid00380
Tryptophan metabolism
vid00410
beta-Alanine metabolism
vid00640
Propanoate metabolism
vid00650
Butanoate metabolism
vid00907
Pinene, camphor and geraniol degradation
vid00930
Caprolactam degradation
vid01100
Metabolic pathways
vid01110
Biosynthesis of secondary metabolites
vid01120
Microbial metabolism in diverse environments
vid01200
Carbon metabolism
vid01212
Fatty acid metabolism
Module
vid_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DBX26_15550 (fadB)
00650 Butanoate metabolism
DBX26_15550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DBX26_15550 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DBX26_15550 (fadB)
00310 Lysine degradation
DBX26_15550 (fadB)
00380 Tryptophan metabolism
DBX26_15550 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DBX26_15550 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DBX26_15550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DBX26_15550 (fadB)
00930 Caprolactam degradation
DBX26_15550 (fadB)
Enzymes [BR:
vid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DBX26_15550 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DBX26_15550 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DBX26_15550 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DBX26_15550 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Carboxyl_trans
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
AXT72300
LinkDB
All DBs
Position
1:complement(3318052..3320223)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDEALDALIAHQGLKGVMLTSD
KDAFIVGADITEFLGLFAKTDEELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADNAMEIITQGKALRADEALK
LGLLDAVVDSDSLHASALQTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPITSVLTIEEGARFARNEALDVERKHFVKLAKSEEAKSLVGLFLSDQYIK
GIAKKAAKSANKDTKRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMNEASKL
LNKRLATGRLDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVEQNVG
EDTVITSNTSTIPINVLAQSLQRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDTLFEANKFGQKNGSGFYSYSVDKKGK
PKKTFSEEILPLLADVCADKRDFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYIETAKQHAELGAMYQVPQMLIDMAAKGETFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaggatggcattgcagagctg
agtttctgctcgccaaaatccgtaaataaactcgatttagcgacacttgagtcactagac
gaagcccttgatgcacttatcgcacaccaaggtctgaaaggcgtaatgctgacttcagat
aaagatgcgttcattgtaggtgcagatattactgaattcttaggcctgtttgctaagact
gatgaagaactggatcagtggctacaattcgccaacagcatcttcaacaaacttgaagac
cttccagtcccaaccatctcagtcatcaagggccacgctcttggtggtggctgcgagtgt
gtattggcaacagacatgcgcatcggtgataaaaccaccagcatcggtctaccagaaacg
aaacttggcatcatgccaggctttggtggttgtgtacgtctacctcgtgttatcggtgct
gataacgcgatggaaatcattacacaaggtaaagcgctccgtgctgatgaagcactaaaa
cttggcctgttagatgcggttgtcgattcagactctctgcatgcatccgctctgcaaaca
ctgacgtctgcaatcaacgaaaaacttgattggcaagctcgccgcaaacaaaagacatca
ccactaacactaagcaagctagagtcgatgatgagcttcaccatggcaaaaggcctggtg
gcacaaaaagcgggtccacactacccagctccaatcacatcagtccttactattgaagaa
ggcgctcgatttgcacgtaatgaagcgctggatgttgaacgtaagcacttcgttaaactg
gcaaaatcagaagaagcgaaatcactggtcggtctgttccttagtgatcagtacattaaa
ggcatcgctaaaaaagcggcaaaatcagcaaacaaagacactaaacgtgctgctgtactt
ggcgcaggtatcatgggtggcggtatcgcttaccagtcagcactgaaaggtgtgcctgta
ctgatgaaagacatcgctcaggcctcattagatttgggcatgaatgaagcatcgaaactg
ctgaataagcgtcttgctacaggtcgtcttgacggcttcaagatggcgggcatcctcgcg
tctattactccaagcttgcactacgctggcatcgaaaactcagatgtgattgtcgaagcc
gttgttgagaacccgaaagtgaaggctgcggtacttagcgaagtcgagcaaaacgtgggc
gaagatacggttatcacgtcgaacacatcgaccattccaatcaacgtactggctcagtca
ctacaacgcccagaaaacttctgtggtatgcacttctttaaccctgtgcatcgcatgcct
ttggttgagatcatccgcggtgaaaaaacgtcagatgaaacaatcaaccgtgttgtggct
tacgcagcgaaaatgggtaaatcaccaatcgttgttaatgactgccctggtttcttcgta
aaccgcgtactattcccgtactttggtggtttcagcatgctacttcgtgacggcgctgac
ttcacacaaatcgataaaatcatggaacgcaagtttggttggccaatgggtccagcatac
ttgcttgacgttgtaggtatcgataccgctcaccacgcacaagccgtcatggctgaaggc
ttcccagaacgtatgggcaagcaaggtcgcgatgcgattgatactttgtttgaagccaac
aagtttggccagaaaaatggcagcggcttctacagctattcagttgataagaaaggcaaa
ccgaagaagaccttctctgaagaaatcttgccactattagctgacgtatgtgcagataaa
cgtgacttcgacgagcaaaccattatccagcgtatgatgattcctatgatcaacgaagtg
gtgctgtgtctacaggaaggcattatcgcgacaccacaagaagcggacatggctctggtt
tacggtctgggcttccctccattccgcggcggtgtattccgctacctagacagcgttggt
attgctgagtacatcgaaacagcaaaacaacacgctgaactaggcgcgatgtaccaagta
ccgcaaatgctgattgatatggcagccaaaggcgagaccttctacggcgcacaacagcaa
ggctctatctaa
DBGET
integrated database retrieval system
