Vibrio sp. dhg: DBX26_16225
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Entry
DBX26_16225 CDS
T11094
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vid Vibrio sp. dhg
Pathway
vid00260
Glycine, serine and threonine metabolism
vid00630
Glyoxylate and dicarboxylate metabolism
vid00670
One carbon pool by folate
vid00785
Lipoic acid metabolism
vid01100
Metabolic pathways
vid01110
Biosynthesis of secondary metabolites
vid01200
Carbon metabolism
Module
vid_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DBX26_16225 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DBX26_16225 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DBX26_16225 (gcvP)
00670 One carbon pool by folate
DBX26_16225 (gcvP)
Enzymes [BR:
vid01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DBX26_16225 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF6227
DUF7572
Motif
Other DBs
NCBI-ProteinID:
AXT72526
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Position
2:complement(122567..125431)
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVARHNGPNKSDQQKMLDAINVANLDALIEETVPAQIRLEKPLALAE
AKSEADMLVAMRKFADQNQIKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTLEVVKTRAKYIGFEVLVGSLESLPEQDVFGALVQYPGTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDVNGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVFHGAEGLRTIAR
RTHHMTAILAAGLTKSGYELAHNSFFDTITINTDGKTEELFAKAQAADINLRKLDGKLGI
SFDETTTTDDINALFDVFGVQQDVNALSSEIATNEFAAIPEALRRTSKFLTHPVFNTHHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPIEQAAG
YSALAKDLKEKLCEITGYDDFSLQPNSGASGEYAGLIAIQRYHDSRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEDGNIDMTDLAAKIEKHKDNLSSIMITYPSTHGVYEEHV
KEVCEMVHAAGGQVYLDGANMNAQVALTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVEGKELAVSAADMGSASILPISWAYIAMMGEAGLQEATKVAIL
NANYVMERLRPHYPILYRGKNGRVAHECIVDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLEELDRFCEAMIAIREEMTKVKNGEWPLENNPLVNAPHTQVDL
SAAEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIENYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaatgagttcgttgctcgccacaacggc
ccaaacaaatctgaccaacaaaaaatgttggatgcgatcaatgttgctaaccttgacgca
cttatcgaagaaacggttccagcacaaattcgcctagaaaagccactagcactagcagaa
gcgaaaagcgaagcagacatgctggttgcgatgcgtaaattcgctgaccaaaaccaaatt
aaacgtacgttcatcggccaaggttactacaacaccttcacgccaaatgtcattctacgt
aacgtactagaaaacccaggctggtacacagcttacactccttaccaaccagagatctct
caaggtcgtctggaagcgcttcttaactaccaacaaatggtcatggacctaactggtatg
gaaatcgcgaacgcttctcttcttgacgaagcaacagcagcagctgaagcgatgacgcta
tgtaagcgtgcaggtaagagcaaaagtaacgtattcttcgtggctgacgatgttcaccca
caaactctagaagttgtaaaaactcgtgctaaatacattggctttgaagtactcgttggt
tcacttgaatcactaccagaacaagacgtatttggtgcgctagttcagtacccaggtaca
acaggtgaagtacgagatctaacggacatcatcgcgaaagcacaagctaacaaaacatta
gtaacggttgctactgacctacttgcttctactctgctgaaaccagcaggtgaaatgggt
gcagacgtggttattggttcagctcagcgtttcggcgtacctatgggttacggcggtcca
cacgcagcattcatggcaactcgtgataagcataagcgtacaatgcctggtcgtgtaatc
ggtgtttctatcgatgtaaacggcaaccaagcactgcgtatggcgatgcaaacgcgtgaa
cagcacatccgccgtgaaaaagcgacatcaaacatctgtactgcgcaagcactactagcg
aacatggcatctttctacgcggtattccacggcgcagaaggtctacgcactatcgctcgt
cgcactcaccacatgactgcgattctggctgctggtctgactaagtctggctacgagctt
gctcataatagcttctttgacaccatcactatcaatactgatggcaaaactgaagagctt
ttcgcgaaagcacaagcggcagacatcaacctacgtaagcttgacggcaaactaggtatc
agcttcgacgaaacaacaactactgacgacatcaacgctctatttgacgtgtttggtgtt
caacaagatgttaacgctctgtcttctgaaatcgcaaccaacgagtttgctgctattcct
gaagcgctacgtcgtacgtctaagttcctgactcacccagtattcaacacgcaccacagc
gaaacgcaaatgatgcgttacctgaaacagctagagaacaaagacttctcactgactcac
ggtatgatcccgctgggcagctgtacgatgaaactgaacgcagcagcagagatgatccct
gttacttggcctgagtttggttctatccacccattcgctcctatagagcaagcggcaggt
tactctgcgctagcgaaagatctgaaagagaagctatgtgaaatcactggttacgatgat
ttctctctacagccaaactctggtgcgtctggtgaatacgctggccttatcgcgattcaa
cgctaccacgacagccgtggcgaaggtcaccgtaacgtatgtttgatcccaagctctgcg
cacggtactaacccagcgacagcgtcaatggtatcaatgaaagtcgttgtggttaaatgt
gatgaagatggcaacatcgacatgactgacctagcagcgaaaattgagaaacacaaagac
aacctatcaagcatcatgatcacttacccttctacgcacggcgtatacgaagagcacgtg
aaagaagtatgtgaaatggttcatgcagcaggtggtcaggtttacctggacggcgctaac
atgaacgcacaggttgccctaacctctccaggtttcatcggctctgacgtttctcacttg
aacctacacaaaaccttctgtatccctcacggtggtggtggtccaggtatgggtcctatc
ggtgttaaatctcacctggcacctttcctaccaggtcacatcgagaacggtgttgaaggt
aaagagctagcggtttctgcagcagatatgggtagcgcatctattctacctatttcttgg
gcttacatcgcgatgatgggtgaagctggcctacaagaagcgactaaagttgccattctt
aacgccaactacgtgatggagcgtttgcgtccacactaccctattctttaccgtggtaaa
aacggccgtgtagcgcacgaatgtatcgttgatattcgtccgcttaaagaagaaacaggc
atcagcgaagaagacatcgcgaagcgtctaatggactacggtttccacgcgcctacaatg
tcattcccagttgctggtacactgatggttgaaccaactgaatcagaagatttggaagag
ctagaccgcttctgtgaggcaatgatcgcaatccgcgaagagatgacaaaagtgaaaaat
ggtgagtggccactagagaacaaccctctagttaacgctccacacactcaagttgatctt
tcagcagcagaatgggatcgcccttactctcgtgagctaggctgtttcccatcgaaagcg
actaagtcttggaaatactggccaacagtgaaccgcgtagataatgtttacggcgaccgt
aacctaatctgctcgtgcccaagcattgagaactacgaagactaa
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