Vibrio sp. dhg: DBX26_17110
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Entry
DBX26_17110 CDS
T11094
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vid Vibrio sp. dhg
Pathway
vid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DBX26_17110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vid02000
]
DBX26_17110
Transporters [BR:
vid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DBX26_17110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AXT72688
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All DBs
Position
2:complement(317470..319062)
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AA seq
530 aa
AA seq
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MTEISYASIAKKKKLIRGVVLASVVAAGAAITLSNQETSPEQVTPNRSNTLSISGPWEIS
SLDPSKQGYMLIRMQVVETLLNVDGKGIITSGLATKWQSSEDGLSWHFTLRDNVTFHDGS
KLDAEAVVRSLAIAQRKHGTLNKAEIRSISAISDNEILIELSKPYAAFASLLTNYSNAIL
SPESYEPNGAVKTLYGTGPYQMESFAPPHKFLVKKFDGYWGEEAKIDFATYLTGHRAESR
LLQAKSGEADIVFNLEPSMLGQLKSGNEVQVHSDLIPRTMLVKVNAGHPFLNEARARKAL
SMAIDRASIAKNVLGVPGSETTQIMPSSMSQWFIKDVKNDDFDLDLARSTLGDLGWKRGE
NGTLERDGVPFKLTMITYADRPELTTVATAIQAQWTKLGVDLKVDVTNSSMIPAGHQDGS
LETALIARNFGFIADPLPIISSDFANGGGDWGTMNWENAKVDSTIDRLLHNHDATRAFEL
SQIVAQEIYQDAPVIAISSYSQHTSVNKRVKHFRFDPFERNYFINQMEIN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatatcttatgcttctatcgcaaaaaagaagaagcttattcgtggcgtggtt
ttggcttccgtagttgcagcaggtgctgctattacattaagtaaccaagaaacatcgcct
gagcaggttacaccaaacaggagtaatacattatcgattagtggaccttgggagatttcc
agcctagatccttcaaaacagggatatatgttaattcgtatgcaggtagtagagaccctg
ctcaacgttgatggtaaggggattattacctctggattggcaaccaaatggcaaagcagt
gaagacggcttatcctggcattttacattgcgcgacaacgtaacgtttcatgatggttct
aaactggacgctgaagcggtcgttcgcagccttgctattgctcagcgcaaacacggtaca
cttaacaaggcagagatacgcagtatttccgcgattagtgacaatgagattctaatcgaa
ttgagtaaaccttacgctgcatttgcctcactattgaccaactattctaatgctatcttg
tcgcctgaatcttacgagcctaacggagccgtaaaaacactttacggtacggggccatat
caaatggaaagctttgcaccgccgcacaagttcttggttaaaaagtttgatggttattgg
ggggaagaagcaaaaatcgatttcgcaacctacttaacgggccatcgtgcagaaagtcgt
ttgctgcaggcgaagtctggcgaagccgatatcgtattcaatcttgagccatccatgtta
gggcagctaaaaagtggtaatgaggttcaagttcacagtgacctgatcccgcgaaccatg
ttggtaaaagtaaatgcgggtcatccattcctgaatgaagcgagagcgagaaaggcattg
agtatggcaattgatcgagcgtcgattgcaaaaaatgtgcttggtgtaccgggttcggaa
accacacagataatgccaagttccatgtctcagtggtttattaaagacgtgaaaaacgac
gatttcgatctcgatctggcacgctcaaccttgggtgatttaggttggaaacgcggagaa
aacggcactctagagcgggatggtgtgccgttcaaactgacgatgatcacctatgccgat
cgccctgaattgaccacggtcgcaaccgcgattcaagcgcaatggaccaagcttggtgtt
gacctaaaagtcgatgtcacaaactcaagtatgatcccagcgggtcatcaggatggctca
ctagaaacggcattgatcgcgcgtaattttggtttcatcgctgatccgctacctatcatc
agctctgactttgcgaacggaggcggtgactggggaacgatgaattgggaaaacgcaaag
gtagacagtacgattgaccgcttacttcacaatcacgatgcgacacgtgcatttgagcta
agccagatcgtcgcgcaagaaatttatcaggatgcaccagtgattgctatttctagctac
agccaacatacctcagtgaacaaacgagttaaacactttaggtttgatccgtttgagcgc
aattacttcatcaaccagatggaaattaactga
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