Vibrio sp. dhg: DBX26_18720
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Entry
DBX26_18720 CDS
T11094
Name
(GenBank) chondroitin lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
vid Vibrio sp. dhg
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DBX26_18720
Enzymes [BR:
vid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
DBX26_18720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Ulvan_lyase_2nd
HTH_71
Motif
Other DBs
NCBI-ProteinID:
AXT72989
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All DBs
Position
2:677573..679756
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AA seq
727 aa
AA seq
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MTTQPILLTEKEVEQLRKEVGKPSLMGKTIEANRRQVDAFMRLPLDVPGHGEAGGYEHNR
HKQNYTYMNLAGRLFLITQDEKYAQFVKDLLSLYAEKYLTFDFHIQKNTNPTGRLFHQIL
NEHCWLLFTSLAYSYVASTMTEQERSTVVERIFEPMLDMFTVKYAHDFDRIHNHGIWAVA
AVGICGLAIGKREYLEMSVYGIDRNNTGGFLAQISQLFAPSGYYMEGPYYHRYAIRPLCV
FAEVINRHMPEVDIFNYKHKVIGNTIQALLATAYPNGEFPALNDASRTMGITDIGVQVAV
SIYSQHYGLNDNILGMAKIQNAVWMHPCGLELSQAYEKASAEREIGLPFWPSVELNEGPE
GNNGAQGFIRMQDKTGDVSQLVMNYGQHGMGHGNFDTLGISFFNRGQEVLREYGFCRWVN
VEPKFGGRYLDENKSYARQTIAHNAITIDEQCQNGFDVERADAVHGLPHFFKVEGSEMNG
MSAFANDHYPNTDMQRSVFLLNLEELEAPLLLDLYRVQGEGEHQYDYSHQYDGQIVRTNF
EYQSFAELSTLGEHFGYQHLWKVASGKVQDAALVSWLQGNTYYTWLGTSSNAQSSNDNEV
IFTRTGANDPSFNLRSEPAFILRSQGESTLFASVLETHGYFNEEFEQSVNARGQVKDIHV
VGYNTVGSIVEITTANSLVTVMISNVLGADEQTPHQVEINGKTYSWNGFYALEVTAVETN
TFEQEKH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactacacaaccgattttgttgactgaaaaagaagtcgaacaacttagaaaggaagtc
ggcaaaccgagcctaatgggtaaaacaatcgaagcaaatcgtaggcaggtcgatgctttt
atgcgtttgccattagatgttcctggccatggagaggctggcggctacgagcataaccgc
cacaagcaaaattatacctacatgaatctagctggtcgcttattcttaatcacgcaagac
gaaaagtacgctcaatttgtgaaagatcttctctcgctctatgcagaaaagtacctgacg
ttcgatttccatattcagaaaaacaccaacccaactggtcgtcttttccatcaaatcctt
aatgaacattgctggttattgtttaccagtctcgcatactcttatgtggcgtcgactatg
accgaacaagaacgtagcacagttgttgagcgcatctttgagcctatgctcgacatgttt
accgtgaaatacgcacacgatttcgatcgcattcacaatcatggtatttgggcagttgct
gccgttggtatttgtggtttggcgattggtaaacgcgaatatctagaaatgtctgtttat
ggcatcgatagaaataacactggcggcttcctagcacagatttcgcaactgttcgctccg
tcgggttattacatggaaggcccgtactatcatcgatacgcaattcgtcctctgtgtgta
tttgcagaagtgattaaccgccatatgccagaagtggatatctttaattacaaacacaaa
gtgatcggtaatacgatacaagcactgctagctaccgcctaccctaacggcgagtttcca
gcactcaacgatgcttcacgcactatgggtatcaccgatataggtgtgcaagttgccgta
agcatttatagccagcactatggtttgaacgacaatattttaggcatggcgaagatccaa
aacgcggtatggatgcacccatgtggccttgaactatcacaagcttatgagaaagcaagc
gcagaacgcgaaatcggtctacctttctggccaagtgtcgaacttaacgaaggccctgaa
ggcaataacggcgcgcaaggctttatccgcatgcaagataagacgggcgatgtttctcaa
ctcgtgatgaactacggccaacacggtatgggacacggtaacttcgatacactcgggatt
agtttctttaaccgtggacaagaagtattgcgagaatatggcttctgccgttgggtaaac
gtagagccaaaatttggtggtcgttaccttgacgagaacaaatcatacgcgcgtcagact
atcgctcacaatgcaatcactattgatgagcaatgccaaaacggctttgatgtggaacgt
gccgatgcagtacacggcttgccacatttcttcaaagtcgaaggctcagaaatgaatggt
atgagcgcctttgctaacgatcattacccaaatacagatatgcaacgcagcgtatttctt
ctcaaccttgaagagttagaagcgccattgctgcttgatctttatcgcgttcaaggggaa
ggtgaacaccaatacgattactcacatcaatatgatggtcagatcgtacgaaccaacttc
gaataccaaagttttgcagagttgagtacgcttggtgagcatttcggttaccaacatctt
tggaaagttgcgagcggaaaagtacaagacgccgcactggttagttggctacaaggcaac
acttactacacttggttaggcacaagcagcaatgctcaatccagcaacgacaatgaagtt
attttcactcgcactggagcaaatgaccctagctttaacttacgtagtgaaccagcattc
atcctgcgcagccaaggggagtcaaccctgttcgcatctgtgctagaaacacatggttac
tttaacgaagaatttgagcaatctgtcaacgcacgcggccaagtgaaagacattcatgtc
gtcggctacaacaccgtaggcagcattgtagaaatcacaacagcaaactcattggtcaca
gtaatgatcagcaatgtattaggtgcagacgagcaaaccccgcaccaagttgaaattaac
ggtaaaacatacagctggaatggcttctacgcgcttgaagtgaccgcagtagaaacaaat
acattcgagcaggagaaacactaa
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