Vibrio sp. dhg: DBX26_18805
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Entry
DBX26_18805 CDS
T11094
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vid Vibrio sp. dhg
Pathway
vid03030
DNA replication
vid03430
Mismatch repair
vid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBX26_18805
03430 Mismatch repair
DBX26_18805
03440 Homologous recombination
DBX26_18805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vid03032
]
DBX26_18805
03400 DNA repair and recombination proteins [BR:
vid03400
]
DBX26_18805
Enzymes [BR:
vid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBX26_18805
DNA replication proteins [BR:
vid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBX26_18805
DNA repair and recombination proteins [BR:
vid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBX26_18805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
HET
Motif
Other DBs
NCBI-ProteinID:
AXT73005
LinkDB
All DBs
Position
2:702809..703525
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AA seq
238 aa
AA seq
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MKRLVEYLHPFERMNRKRVSYAKKRGLPTYLKNLLRSPQLPVSQLASETQFVVLDLETTG
LDSEEEVILSIGWVEVKHGHIDLSTSKHMYVHSDSKIKPETAVVNHITQQMLADGVSIHE
AMRSFFKVAEGKLIVAHGCLVEANFINQYLLNVFNIDTPPLLWIDTLCIEKRLQKAINSP
DEYDVTLSATRARYGLPAYNGHNALADAVATAELLLAQQTRITPQAKTTIGTLYRLSI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttagttgaatacctccacccttttgagcgaatgaatcgtaaacgagtcagt
tacgctaaaaaacgaggactccctacatatctaaagaatctattacgttccccacaatta
cccgtaagccaacttgcttcggagacacaatttgttgttttggatttagaaactacaggt
ctagatagtgaagaagaagtgattttgtcgattggttgggttgaagttaaacacggccac
attgacttatctacaagtaagcacatgtacgttcacagcgactcaaaaattaagccagaa
accgctgtagttaatcatattacgcaacaaatgctcgccgatggtgtttctatccatgaa
gcgatgaggtcattctttaaagtggcagaaggaaaactgattgttgctcacggttgcttg
gtcgaagcaaacttcatcaaccagtatctgctaaacgtattcaacatcgatacacctcct
ctgctttggattgacacattatgtattgaaaagcggttacaaaaagcgatcaactcccct
gatgaatatgatgtgacactatccgcgacaagagcacgttatggactacctgcatacaac
ggtcataacgcactggcagacgcagttgccaccgctgaattattactcgctcaacaaacc
cgcataactcctcaagccaagacgacgataggtaccctttaccgtctgagtatttaa
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