Vibrio sp. dhg: DBX26_19190
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Entry
DBX26_19190 CDS
T11094
Name
(GenBank) cell division protein DedD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vid Vibrio sp. dhg
Pathway
vid00240
Pyrimidine metabolism
vid01100
Metabolic pathways
vid01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DBX26_19190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vid02044
]
DBX26_19190
Enzymes [BR:
vid01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
DBX26_19190
Secretion system [BR:
vid02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
DBX26_19190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AXT74124
LinkDB
All DBs
Position
2:789224..789688
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AA seq
154 aa
AA seq
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MISKWAKRFYQMAELVASWSKDPSTQVGAVITKQNRIVSVGFNGYPHGVSDSVDTDEREL
KYLKTLHAEENAILFSKRDLDGCDIWVTHFPCPNCAAKIIQTGISRVHCPEQSEDFLSRW
GDKIQVSQDMFDQAGVEVDWLPLEEIEIEGTDVR
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaaatgggcgaaacgtttttaccaaatggccgaattggtggcgtcttggagt
aaagatccctccacacaagtaggtgcagtaattactaagcaaaaccgtatcgtttctgtt
ggctttaacggctatccacacggggtttccgacagcgtggataccgatgagcgagaactt
aaatacttaaaaacactgcatgcagaagaaaacgctattctgttttctaagcgtgattta
gacggctgtgacatttgggtcacgcattttccgtgccctaactgcgcggcaaaaattatt
cagactggcatctcacgcgtacattgcccagagcaatcagaagattttctgtctcgctgg
ggagataagattcaggtgagtcaggatatgttcgatcaagctggcgtagaagtggactgg
ctgccgttagaagaaatcgaaattgaaggaacagacgttcgttaa
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