Vibrio sp. dhg: DBX26_19945
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Entry
DBX26_19945 CDS
T11094
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vid Vibrio sp. dhg
Pathway
vid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DBX26_19945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vid02000
]
DBX26_19945
Transporters [BR:
vid02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DBX26_19945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
TOBE_2
RsgA_GTPase
AAA
TniB
AAA_22
nSTAND1
AAA_16
ORC-CDC6-like
AAA_33
ABC_ATPase
AAA_29
AAA_25
nSTAND3
AAA_28
MMR_HSR1
ATPase
AAA_5
AAA_18
Rad17
AAA_14
NACHT
ATPase_2
NB-ARC
nSTAND_NTPase5
RNA_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AXT73224
LinkDB
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Position
2:953463..954482
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AA seq
339 aa
AA seq
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MSYVTAKNLTKRFGDNTVFEDIQFSIEQGEFITLLGPSGCGKSTLLRSLAGLNPVDGGTI
SVNGEDITHQVPQERGIGMVFQSYALFPNMTVEGNIAFGLKMKRLDADIIQCEVAKVIEL
VDLKGKEKQYPHQLSGGQRQRVALARALVVKPRILLLDEPLSALDAKIRKHLRQQIRDIQ
KEMNLTTIFVTHDQEEAMIMSDRIFLMNRGEIVQAGTPEEIYTQPANEFVAGFMGHYNLV
EADHAKQLFNIDTQSKVAIRPESIYVREQGRQYGNHISAPQSGIIKNHQLLGNVIRYQVE
VNECELTVDLLNRSSERLLANGSQLELLFNLNEIQPVRA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtaaccgcaaaaaacctgaccaaacgttttggtgacaatacggtctttgaa
gacatccaattcagcattgaacagggcgagtttattactctgcttggccctagtggttgt
ggcaaatccactcttcttcgcagcctggcagggcttaaccctgttgatggtggcaccatt
tcggttaacggagaggacatcacccaccaagtaccgcaggagcgtggcattggcatggtg
tttcagtcttatgctctgtttcccaatatgacggttgaaggcaacattgcgtttggcctg
aaaatgaaaagactagacgctgacatcattcagtgtgaagtggcgaaagtgattgagctg
gttgacctgaaaggcaaagaaaaacagtacccgcatcaactttccggcgggcaacgtcaa
cgtgtcgcactagcacgcgccttggtggtgaagccgcgaattttactcctcgacgaacct
ttgtcagctctggatgccaaaatccgtaagcaccttcgtcagcaaattcgcgacatccag
aaagaaatgaacctgaccacgatcttcgttactcatgatcaggaagaagccatgatcatg
tctgatcgtatcttcctgatgaatagaggggaaatcgttcaggctggtacacctgaagag
atttacacgcaaccagccaacgagtttgttgccggctttatgggacactacaacttggtg
gaagccgaccacgccaaacagctttttaatatcgatacgcaaagcaaagtggctattcgc
cctgaatctatatatgtcagagagcaaggccgtcagtatggtaaccacatttccgcacca
caaagcggtatcatcaaaaatcaccagttgctgggtaatgtaattcgctatcaggtggag
gttaacgagtgcgaactcaccgttgatttactcaaccgttcatctgagcgactattagca
aatggcagccagttagaactactctttaatctaaacgaaattcaaccagtgagagcttaa
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