Vibrio sp. dhg: DBX26_20125
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Entry
DBX26_20125 CDS
T11094
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vid Vibrio sp. dhg
Pathway
vid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBX26_20125 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vid03019
]
DBX26_20125 (groL)
03110 Chaperones and folding catalysts [BR:
vid03110
]
DBX26_20125 (groL)
03029 Mitochondrial biogenesis [BR:
vid03029
]
DBX26_20125 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vid04147
]
DBX26_20125 (groL)
Enzymes [BR:
vid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DBX26_20125 (groL)
Messenger RNA biogenesis [BR:
vid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DBX26_20125 (groL)
Chaperones and folding catalysts [BR:
vid03110
]
Heat shock proteins
HSP60 / Chaperonin
DBX26_20125 (groL)
Mitochondrial biogenesis [BR:
vid03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DBX26_20125 (groL)
Exosome [BR:
vid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DBX26_20125 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DBX26_20125 (groL)
Exosomal proteins of breast cancer cells
DBX26_20125 (groL)
Exosomal proteins of colorectal cancer cells
DBX26_20125 (groL)
Exosomal proteins of bladder cancer cells
DBX26_20125 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
NNH2
Motif
Other DBs
NCBI-ProteinID:
AXT73258
LinkDB
All DBs
Position
2:complement(987689..989287)
Genome browser
AA seq
532 aa
AA seq
DB search
MAAKDVLFANDARQKMLKGVNLLADAVKVTLGPKGRNVVLDKSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQSFINEGLKAVASGMNPMDLKRGI
DKATEAAVEKLREMSKPCSDKESITQVGSISANSDRAIGEIIAEAMEKVGRNGVITVEEG
QGLDNELSVVEGMQFDRGYLSPYFITNQENGSVELDNPYILLVDKKVSSIRELLPVLEAV
AKSSRSLLIIAEDIEGEALATLVVNNMRGIVRAAAVKAPGFGDNRKAMMEDIAVLTAGTV
ISEQIGLELEKVTLEQLGSAKKVTINKDTTTIVGGIAKAEAIADRVASIEKQMETTTSQY
DKDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALT
KIAKELADLKGENDDQNVGIRVALRAMEEPLRQIAANAGDEASVVANAVKAGDADYGYNA
ATGEYGNMIEMGILDPAKVTRSALQFAASVAGLMITTEAMITNHVDDKELDI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagatgtgttatttgctaatgacgcgcgtcaaaaaatgctgaaaggtgtg
aacttacttgcggatgcagtaaaagtgacactcggtccaaaaggtcgcaatgttgtttta
gataaatcttacggtgcgccaaccatcacgaaagatggggtgtctgttgcgaaagaaatc
gagctgaaagacaaattcgaaaatatgggcgcacaaatggtgaaacaagttgcgtccaaa
gcgaacgatgaagcgggtgacggtacaacaaccgcaacggtgttggcacaatctttcatc
aacgaaggtcttaaagcggtggcttcgggcatgaacccaatggacctaaaacgcggtatc
gacaaagccaccgaagcggcggttgagaaactacgtgaaatgtccaaaccatgcagtgac
aaagaatccatcactcaagttggtagcatttctgcaaacagcgatcgtgcgatcggtgaa
atcattgcagaagcgatggaaaaagtaggtcgcaatggtgtgattaccgttgaagaaggt
caaggcctggacaacgaattgtctgtggttgaaggtatgcaattcgaccgcggttacttg
tcgccatacttcatcactaaccaagaaaatggcagcgtagagctagataatccatacatt
cttttggtggacaaaaaagtcagcagtatccgtgagctattgccagtgctggaagcggtg
gcaaaatcttctcgctcactattgatcattgctgaagacatcgaaggcgaagcgctggcg
acactggtcgtgaacaacatgcgtggtatcgtacgcgcagcggccgtgaaagcacctggg
tttggtgacaaccgcaaagcgatgatggaagacattgcggtactaaccgcgggtaccgtt
atttctgaacaaatcggtctagagctagaaaaggtaacgttagagcaactgggtagtgcg
aagaaagttactatcaacaaagatacaaccacaatcgtaggtggcattgccaaagccgaa
gcgattgctgatcgcgtggcgtcgattgaaaaacaaatggaaaccacgacatctcaatat
gacaaagacaagctacagcaacgtattgcgaagctttctggtggcgtagcggtgatcaag
atcggtgcggcaaccgaagttgagatgaaagagaagaaagatcgcgtggacgatgcgcta
catgcaactcgtgccgcggttgaagaaggtattgtcgctggtggtggtgtggctctaact
aagatcgcgaaagaattggcggatctaaaaggtgaaaacgatgatcaaaacgttggtatc
cgtgttgcactccgtgcaatggaagaacctcttcgccaaatcgcagccaacgcaggtgat
gaagcatccgtagttgcgaacgccgtaaaagcgggtgatgcagattacggttacaacgca
gctacgggtgaatacggcaacatgatcgaaatgggcatcctcgacccagcgaaagtaaca
cgttctgcgcttcaattcgcagcgtctgttgctggtttgatgatcaccacagaagcgatg
atcactaaccacgtagatgacaaagagcttgatatctaa
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