Vibrio sp. dhg: DBX26_21125
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Entry
DBX26_21125 CDS
T11094
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein OppA
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
vid Vibrio sp. dhg
Pathway
vid01501
beta-Lactam resistance
vid02010
ABC transporters
vid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DBX26_21125
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DBX26_21125
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DBX26_21125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vid02000
]
DBX26_21125
Transporters [BR:
vid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
DBX26_21125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AXT73438
LinkDB
All DBs
Position
2:1191596..1193221
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AA seq
541 aa
AA seq
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MDIKKFSKTLLISSLFTPVVTISAFADVIPEDVQLAAEQVLVRANDAEAATLDPAKAEGM
PEMHILRDLFEGLVIQDRDGNIVPGVAQSWETKDNQTFVFHLRKDAKWSNGDPVTADDFV
YALRRAVDPQLASPNVWYLEMTSIKNIVDVAEGKLPVEELGVKALDKYTLRFELESKVPY
FVAMTGHTSMMPVHKSTVEQGGKPWSDPKQFVGNGAFVLDKWVVNERIELKKNPNYWDAD
NTHLTNVTYIPFENQNASINRYVVGEVDITSDVPTHMAQKLEQEYQDAYTVVPLLCTYYY
AFNTTRPPFDDVRVRQAVSYSIMRDVITNGVTQVGNLPAYTFAHQYTAGFDATQPDYSNW
TQQQRDEKARQLLEEAGYGKDKPLDFKLLYNTSESNKAIAVAIASMLSENLDAKVELENQ
EWKSYLVARKQGNFDVMRASWCGDYNEASTFLSLLRSDSSGNFARYQSPEYDQAMDNALA
TTDDKKRQAYYDEAEKLIAADVPIAPIYYYMQARLVRPNVGGFAKNNVEGRIYSKDLYIK
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaaaaattctcaaagacattgcttatttcctctctttttacccctgtcgta
acgatttctgcgtttgcagatgtcatacctgaagatgttcaacttgccgctgagcaagtt
ttagtgcgagcgaatgatgctgaagcggccactctcgatccggcaaaagccgaagggatg
ccagaaatgcatatattgcgagacttatttgaagggttggtgattcaagatcgtgatggc
aatattgttcctggtgtcgcccagtcgtgggaaacgaaagacaaccaaacgtttgtcttc
catttacgcaaagacgcaaaatggtccaacggtgatccagtaacggcagacgactttgtg
tatgcgttaagaagggcggttgatcctcaattggcgtcaccaaatgtttggtatcttgaa
atgacaagcatcaagaacattgtggatgtcgctgaaggtaaactgccagttgaagagtta
ggtgttaaggctctagataaatacacacttcgtttcgagctagaaagtaaagtcccgtac
tttgtggcaatgacaggccacacatcaatgatgcctgttcataaatcgacagtggagcag
ggtgggaaaccatggagcgatccgaaacagtttgtcggtaatggcgcatttgtcctcgat
aaatgggtagtcaatgaacgcattgaactgaagaaaaaccctaattattgggatgcagac
aatacgcacctcaccaacgtaacttacatcccgtttgagaatcaaaatgcctcgattaat
cgctatgtggttggcgaagtagacatcacttctgatgtaccaacacatatggcacagaag
ctggaacaagaatatcaggatgcgtatacagtggtgccattattgtgtacgtattattac
gcgttcaatacaacccgtccgccgtttgatgatgtaagagttcgtcaggctgtgtcttat
tcaatcatgcgcgacgtcattaccaatggcgttacccaggttggtaacttacccgcatac
acgtttgctcaccaatatacggctggttttgatgcgactcaaccggactacagcaactgg
acacagcaacagcgtgatgaaaaggctcgtcagttattagaagaggcgggttatggaaaa
gataagccgctcgattttaaacttctttacaataccagtgagtcgaataaagccattgct
gtggctattgcctctatgctcagtgaaaacttagacgcgaaggtagagttggaaaaccaa
gaatggaaatcttatttagtggcgcgtaagcaaggtaattttgatgtaatgcgagcctca
tggtgtggagattacaatgaagcatcgacattcttgagtttgttaagatcggattcctca
gggaactttgcgcgttaccaaagccctgaatacgaccaggcgatggacaacgcactcgcg
accacagacgataaaaaacgtcaggcgtactacgatgaagccgaaaaactgattgcggca
gatgttcctatcgccccaatttactattacatgcaggcgagattagtgcgtcctaacgtt
ggtggctttgctaaaaacaacgtagaaggccgaatttactctaaagacctgtacattaag
aagtaa
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